Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2537 ATGTGGAATTCCTTTTGGAGATCAAGGGATCGTTTCTCCCTGGACCAACTTAGGTTCTTAACCGATCAATTAACGAAGGTAGAAATTATTAGTGAGGTTAATAAGGGTTTTGTAATTGAGGCACTGAGATCAATTGCGGAGTTGATAACATATGGTGACCAACATGACCCCAGTTTTTTTGAATTCTTCATGGAAAAGCAAGTCATGGGTGAATTTATACGTGTTCTGAAACTTACCAGAACTGTGAGCGTTCCACTTCAGTTGCTTCAAACAGTGAGCATTATGGTCCAGAACCTAAAAAACTATATGTTCAGTAATGAATATATAAATTACCTGATAACTTATCCGTTTGACTTTCGAAATGAAGAGCTGCTGTCGTACTACATATCCTTTTTAAGGGCAATAAGTGGAAAATTGAACAAGAATACAGTTTCACTGCTTGTGAAGACTCATGGTGACGAAGTAGTTTCATTTCCACTTTATGTAGAGGCCATACGCTTTGCTTTTCATGAGGAGAGCATGGTTCGCACTGCAGTACGGGCTATAACTCTTAATGTTTACCATGTTGGAGATGACTCTGTCAATAGATATATAACCAGCACTCCTCACAAAGATTACTTCTCAAACCTGGTTTCATTCTTTAGGAAGCAGAGCTTGGATTTTAATAAACTGCTTTCTGATACACAGCTAAATCCGGGCCCAGATTCAATGTCGGCAATTATTGCTGCTACAGATGAAATTGAGGATAACCTGTACTACTTCAGTGATGTTGTCTCTGCTGGAATTCCTGATGTTGGGAGACTCATTACTGATGGCATTATGATGATTTTGATATTCCCATTACTTCTTCCTTCCCTAGGGGTCATGCCCAATAATGACATGCAAGATGCCGCTGTCCCTTCTCTATACTTACTTTGTTGCATCCTGAGGATTGTCAAAATCAAAGATTTGGCAAACACTATTGCTGGTGCTCTTTTTTATCCCTCAGAGGCCTTTACAAAGAGTTCTCAGGGTTTTCATTCAGATGGTGTTCTAGTGCAAAATGATTGTACCAGTTCAAATTTGTCTTTAAGGGAGGTTCTGCTTGCTTACGTAACAAAAGGAAGTGATGTCCTAGTTTTGGGTTCTTTGAGTGTGCTTGCTACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGAAAGCAACATAAAAAATTGTTATTGCAAGCTTTAGTTGGAGAGGGTTCAGGCGAAGAACAACTTTTTCCATCCAAAAGTAATAGGGATGGCATTGGTAATAATATCAATGTCTATCATAAAAAGATCAAGGAGCAGTATGGAGTATCTTTTCTGCCTTCTGATGTGGGAATAAGTCCTCGTATACATAGATTTCAAGTGATTGATGCACTAGTGAACCTCAGTTGTCGCACTAATATATCTGCAGAGATACTATGGGATGGTGGTTGGCTTTTGCGTCAGTTGCTTCCTTACAGTGTGTCAGAATTCAACAGCCATCACCTTGATTTACTGAAAGTTTCATACAAGAGTTATGCTTCTGCTCTTGTAGAGGAGGTTAGAGGTATTTGGTCCGACTTACTTATTTCTGTTCTCTGTGATGAATGGAGAAAGTGCAAAAGAGCAATGGAGTCATCATCTCCTCGGAAAGAACCAAATTGCATACTTTTGCTACCATGGAAGATTTCTTCAGGAGGTCATATTCCAGAGGGGTCATCTTTTGCTTCTGGTAAAAGAATGCATGAGTTGGTGAAGGTATTTGTACTACTGCACCAGCTTCAAATATTCACTCTTGGCAAAACTTTAACAGAACAACCACTGATTTACCCTCCTGGTGATCTCCCTGCAAATTGCCGTGCCCAAGGTTCTGGGCTTGATGTGTCAGGCCCGAAGGCAGGAACTGAAGTCAGCCTTGGCAATGCCCTTCCTTGTAGGATAGCTTTCGAGAGGGGAAAAGAGCTTCATGTTTACTTTCTAGCAATATCTTTAGGAATTTCTGGATGGCTTGTTGTTGCAGAAGAATTGCCACTGAAGAAGTCTCATGGAGTGGTTCGGGCTGTTGCCCCTTTGGCTGGGTGCAATCCTAGGATTGAGGACAATCATGCGATGTGGTTACACTTGCGGATTCGGGCTTCTTCTTTACCCTTTATAGATCCTGTCCACTTCAAAGACTTTCGGAAAAAGAAAACAAGAGCTTCGGTAGATGGCAGATGGACATTGGCGTTCAAAGACGAGGAGACTTGCAAATCTGCTTTTCTCATGACTGTTGAGGAAATCAATTTTCTGAGTAATGAGGTTCATAGAAGACTAAAGCCTTTGCTCAACCTTGAAACTTCAATAGATTTACCAGGTTCGACTTTTTGTTCTCCGAAGGATTCTTTTAGAACACATCCAAATTAA 2424 0.4059 MWNSFWRSRDRFSLDQLRFLTDQLTKVEIISEVNKGFVIEALRSIAELITYGDQHDPSFFEFFMEKQVMGEFIRVLKLTRTVSVPLQLLQTVSIMVQNLKNYMFSNEYINYLITYPFDFRNEELLSYYISFLRAISGKLNKNTVSLLVKTHGDEVVSFPLYVEAIRFAFHEESMVRTAVRAITLNVYHVGDDSVNRYITSTPHKDYFSNLVSFFRKQSLDFNKLLSDTQLNPGPDSMSAIIAATDEIEDNLYYFSDVVSAGIPDVGRLITDGIMMILIFPLLLPSLGVMPNNDMQDAAVPSLYLLCCILRIVKIKDLANTIAGALFYPSEAFTKSSQGFHSDGVLVQNDCTSSNLSLREVLLAYVTKGSDVLVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEQLFPSKSNRDGIGNNINVYHKKIKEQYGVSFLPSDVGISPRIHRFQVIDALVNLSCRTNISAEILWDGGWLLRQLLPYSVSEFNSHHLDLLKVSYKSYASALVEEVRGIWSDLLISVLCDEWRKCKRAMESSSPRKEPNCILLLPWKISSGGHIPEGSSFASGKRMHELVKVFVLLHQLQIFTLGKTLTEQPLIYPPGDLPANCRAQGSGLDVSGPKAGTEVSLGNALPCRIAFERGKELHVYFLAISLGISGWLVVAEELPLKKSHGVVRAVAPLAGCNPRIEDNHAMWLHLRIRASSLPFIDPVHFKDFRKKKTRASVDGRWTLAFKDEETCKSAFLMTVEEINFLSNEVHRRLKPLLNLETSIDLPGSTFCSPKDSFRTHPN* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2537 807 Pfam Uncharacterised conserved protein 42 187 IPR019155 -
Vra7g2537 807 PANTHER PROTEIN TRANSPARENT TESTA 9 1 338 - -
Vra7g2537 807 PANTHER PROTEIN TRANSPARENT TESTA 9 334 790 - -
Vra7g2537 807 PANTHER UNCHARACTERIZED 1 338 IPR039272 -
Vra7g2537 807 PANTHER UNCHARACTERIZED 334 790 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2537 Vra-Chr7 45666462 45675426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2537 K19513 - gmx:100786267 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2537 7 45666462 45675426 Vra7g2537 7 45666462 45675426 ECH
Vra7g2537 7 45666462 45675426 Vra5g0330 5 3207608 3222465 PCT