Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2526 ATGGGAACGTTCCGGACCTTAAGAAAGGCCTACGGTGCTCTCAAAGACTCTACCAAGGTTGGCCTAGCCAAGGTCCATAGCGAATACAAGGATTTGGATGTTGCTATTGTGAAGGCTACCAGTCATGTAGAATATCCTCCAAAGGAACGTCATGTCAGAAAGATTTTCTCTGCAACTTCGGCACACCAACCACGGGCAGATGTGGCTTACTGCATACACACACTTGCTAGAAGGCTTGCAAAGACACGGAATTGGATAGTTGCTGTAAAGACATTGATAGTCATTCATAGAATATTAAGAGAGGGTGATCCTACTTTCAAAGAAGACCTCATAAACTATGCGCGTAGGGGACGTTTTCTTCAAATATCCAATTTCAAAGATGACTCGAGTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTATTTTTAGAAGAAAGGCTTGAGTGTTTTAGAATCCTTAAATATGACATCGAGGCTGAGCGTTTATCAAGACCATCACCCGTTATAACTAAGGGGCATAGCAGAACACGGTCGTTGACTAAAGAAGGGCTATTGGAGCAGTTGCCTGCACTGCAGCAACTTCTATACCGCCTAGTTGGTTGTCAGCCTGAAGGTTTGGCTGTCAGCAGTTACCTAATACAATATGCACTGGCCTTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCCCTGAATGATGGAATCATAAATCTTGTGGATGTGTTCTTTGTTATGCCAAAGTATGATGCAATCAAGGCGTTACACGTTTATAAAAGGGCTAGCCAACAGGCTGATAATCTTGCCGAGTTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAATCTTGAGACAGCCACCTGCTTCTTTTCTTGCCACGATGGAAGAATACGTTAAAGAAGCACCCTTGAATGCATCTAATAGACTGGAGTATCACGAAAATGGTCAATCACCTAAAAAGGAAGCAGAACCTAAAGAATCTGAAGAGGCTCAAGCAACTGAAAAACCAGATGAAGAAAACAAAGAGGAGGAACAGGTGCATGAAGACGAACCAGAGCCTAAGGAAGAGGAAGTGGAACTTCCTCCTTTGATATCAACTGATTCTACTGATGATTTGCTGGGTCTAAACGAAATAAATCCAAAAGCCCGGGAACTAGAAGAAAGCAATGCTTTGGCGCTAGCAATTGTACCAGCCGGAGGAAATAACTCAAGCAGTCTTGATTTGGCTTACACAAATGGAACTTCGGGTTGGGAACTTGCACTGGTTACAACACCAAGTAACCATACAAGCCAAGCGCCAGATCGAAAAATGGCTGGTGGGTTTGACAAGCTATTACTAGACAGTTTGTATGAAGATGAAAAGGCTAGGAGACAACTTCAACTCCGAAATGCAGGCTATGGATATGGGGAAATGGATACACATAATCCGTTCAATCATCATAATCAGCAAGATCCATTTGCGGTGTCCAACAACATAGCACCTCCAACCAATGTGCAAATGGCATTCATGGCTCAGCGACAGCAACAACAAATGATGTTCCAGCAACATCAACAACAAATGATGTTCCAGCAACATCAACAACATAATATGATGATGGGCCCTTACCAGTATCCACAGACTCAATACCATCAACAAATGCCAGTCATGGGTTCTTCTAATCCATTTGAGGACCCCTTACCCGTGCCCACCCATGCTTATAATTCCATGAATCATCAAGGCAACTACAATTTAATATAG 1764 0.428 MGTFRTLRKAYGALKDSTKVGLAKVHSEYKDLDVAIVKATSHVEYPPKERHVRKIFSATSAHQPRADVAYCIHTLARRLAKTRNWIVAVKTLIVIHRILREGDPTFKEDLINYARRGRFLQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRILKYDIEAERLSRPSPVITKGHSRTRSLTKEGLLEQLPALQQLLYRLVGCQPEGLAVSSYLIQYALALVLKESFKIYCALNDGIINLVDVFFVMPKYDAIKALHVYKRASQQADNLAEFYEYCKRLDLARNFQFPILRQPPASFLATMEEYVKEAPLNASNRLEYHENGQSPKKEAEPKESEEAQATEKPDEENKEEEQVHEDEPEPKEEEVELPPLISTDSTDDLLGLNEINPKARELEESNALALAIVPAGGNNSSSLDLAYTNGTSGWELALVTTPSNHTSQAPDRKMAGGFDKLLLDSLYEDEKARRQLQLRNAGYGYGEMDTHNPFNHHNQQDPFAVSNNIAPPTNVQMAFMAQRQQQQMMFQQHQQQMMFQQHQQHNMMMGPYQYPQTQYHQQMPVMGSSNPFEDPLPVPTHAYNSMNHQGNYNLI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2526 587 MobiDBLite consensus disorder prediction 314 382 - -
Vra7g2526 587 SUPERFAMILY ENTH/VHS domain 30 162 IPR008942 -
Vra7g2526 587 MobiDBLite consensus disorder prediction 322 351 - -
Vra7g2526 587 SMART enth_2 30 161 IPR013809 -
Vra7g2526 587 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 574 IPR045192 GO:0048268|GO:0072583
Vra7g2526 587 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Vra7g2526 587 Gene3D - 6 161 IPR008942 -
Vra7g2526 587 SUPERFAMILY GAT-like domain 178 309 - -
Vra7g2526 587 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 574 - -
Vra7g2526 587 Gene3D ANTH domain 174 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vra7g2526 587 CDD ANTH_N 32 154 - -
Vra7g2526 587 Pfam ANTH domain 31 308 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2526 Vra-Chr7 45555757 45562504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2526 K20044 - gmx:100818165 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2526 7 45555757 45562504 Vra7g2526 7 45555757 45562504 ECH
Vra7g2526 7 45555757 45562504 Vra5g0339 5 3340903 3345585 PCT