Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2524 ATGCCGCCGGCTGTGATGGATCCACCATTGCCGGAATCATCGTCGGTGCTGTCTTTTTCCTCCGACATCGTTTTTCAGGGAACGGAGCCTGATAACCGGCGATTCGGGAATCTTAGAGGTCTACAGTGGCGTATAAATCTTGGGGTATTGCCATCTTCTTCCATTGACGATCTTCGTCGTGCCACTGCTAATTCTAGAAGGAGGTATGCCTGTTTGAGAGGGCGCCTTTTGGTTGATCCTCATGCTGTAAAGGATGAAAGTAGTTTGCCTAATCTTGTCATGGATAACCCGCTTTCACAAAATCCAGACAGTACATGGAGTCGCTTTTTTCGCAATGCAGAAATAGAGAGGATGATTGATCAGGATTTGTCACGTTTATACCCAGAACATGGCAACTATTTCCAGACGCCAGGATGCCTAGGCATATTGAGACGAATTTTATTACTATGGTGTCACAGACACCCAGAGTGTGGTTACAGACAAGGAATGCATGAATTACTTGCTCCGGTGCTTTATGTACTCCAATATGATGTGGAGTGTCTTTTAGAAGTTCGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGACCTCCTTTGTCAAGAAAATGATCTTTCTTATAACTTTGATTTTAGAAAATCTTCTGACTCGAAGGAGGATGGAATTGACTCCAATGGAAATGCAATGAAAATCAAGAGTCTCGATGAGCTTGACCCCAAGATACAGAACATTGTGTTGCTAAGTGACGCTTATGGGGCAGAAGGTGAACTAGGCATTGTTTTATCTGAGAAATTCATCGAACATGATGCTTATTGTATGTTTGATGCTTTGATGAATGGGGCTCGTGGTTCAATTTCAATGATCGATTTCTTCTCCTATTCCCCTTTGCCTGGGTCCCATACTGGCTTGCCTCCTGTAATTGAAGCTTCTGCTGCATTGTATCATTTGTTGTCTCATGTGGATTCATCTCTGCATGCCCATCTTGTTGATCTCGGGGTTGAACCCCAGTACTTTGCTCTCCGCTGGTTGCGAGTTTTATTTGGCCGAGAATTTTCACTCAGCAACCTTCTAATAATCTGGGATGAAATATTTTTATCAGATAATAGTAAAGTGGAAAAACATGTCGAGGACAATGCAGACTCTGGTTTTAGGATCTTCAATTCGTCTCGTGGAGCATTTATCTCTGCTATGGCAGTAGCAATGATGCTTCATTTAAGATCTTCACTTCTTGCTGCAGAAAATCCTACAACCTGTCTTCAGAGATTATTAAACTTCCCTGAGAACACGGATATTGAAAAACTAATAGAGAAGGCTAAATCCTTGCAGGCTCTTGCATTAAGTACTGAGATTTCATCGTCGATGCCCTCATTTGTCGAGTATCATAACCAGGTCAAACCAGTTATTGCAAGATCTCACACCCTTTCATCTGAATCAATCTCTCCGAAAACTCCTGTGAATTTGGTACCTGAGAGCTACTGGGAAAAAAAGTGGAGAGTTGTCCACGAGGCTGAAGAACTCAAACAAGATGGGGTGGAAAAACAGGTTCCATCTCGGAAGAAGGGATGGACAGAAAAGGTGAAGTTCAGTTTGAGAAGAACAGAATCTGACCCCTCTTCACCAAGGTCTAGGAGTGGTAAAAAGGAATCCAAGTCACCAGTTAGGCGCAGTTTGTTAGAAGATCTATCTAAGGAACTTGGCTTTGAGGAAGATACTGAAAAACTCAACAGTCATGATAATCTGCCTGCAACAGTTGAAGAGGAGCAACGGGAAGACGGTTCGGCATGCAACAGCTGTTGTTCTCCTGCAGATAGATGTCAAAGTCAAAACACAAGTAGTGTGGAAAACTCACCTGCTATGTATTGCTCAGCTAGCCCTCCTGACGAGGCCAATGATCTCAAAAATGACTGTGAGAAGAGTAGTGTTGGATCTAATTTATCCCTTGATGGAATTAGTGATGCATCACTTAGTAGTCCCTTTGATTCACCTCTTCCAATCTCTGATCATCCTCAGAACGTATCAAACACAACAGGGAAAAATAATAACATTTCTGCTGGAAATTCAACCACGCATTCCAAGGAGAGAAAATTGAACAAATTTCAGTGGCTATGGAAGCTTGGACGGAATAATGGCGAGTTTACTTTAGAGAAAGGAAGCGATGCTTCTGAGGCAATAAAACCTGCCAACAGTTGTGATGACCAAAGCAATACAGTACCCTCTTCTACAGCCAATACGCATTGTAGTCCTCTTGGTTACAAAGGGGAATCTACAGAACAGAATATGACGGACACTATGAGGAACATTGGGCAGTCAATGCTTGAGCATATCCAGGTGATAGAGAAAGCTTTCCAACAGTGGGGAGAGGGAGTATCATTGGATAACATGTCTGAAAACGTTGTGTTGGGTGAAGAGCGGGTTACTCCCATGTCAGCTCTGAAGGAGCTACGCAAAATCAGCAATATTTTGTCTGAGATATGA 2478 0.427 MPPAVMDPPLPESSSVLSFSSDIVFQGTEPDNRRFGNLRGLQWRINLGVLPSSSIDDLRRATANSRRRYACLRGRLLVDPHAVKDESSLPNLVMDNPLSQNPDSTWSRFFRNAEIERMIDQDLSRLYPEHGNYFQTPGCLGILRRILLLWCHRHPECGYRQGMHELLAPVLYVLQYDVECLLEVRKLYEDHFTDRFDDLLCQENDLSYNFDFRKSSDSKEDGIDSNGNAMKIKSLDELDPKIQNIVLLSDAYGAEGELGIVLSEKFIEHDAYCMFDALMNGARGSISMIDFFSYSPLPGSHTGLPPVIEASAALYHLLSHVDSSLHAHLVDLGVEPQYFALRWLRVLFGREFSLSNLLIIWDEIFLSDNSKVEKHVEDNADSGFRIFNSSRGAFISAMAVAMMLHLRSSLLAAENPTTCLQRLLNFPENTDIEKLIEKAKSLQALALSTEISSSMPSFVEYHNQVKPVIARSHTLSSESISPKTPVNLVPESYWEKKWRVVHEAEELKQDGVEKQVPSRKKGWTEKVKFSLRRTESDPSSPRSRSGKKESKSPVRRSLLEDLSKELGFEEDTEKLNSHDNLPATVEEEQREDGSACNSCCSPADRCQSQNTSSVENSPAMYCSASPPDEANDLKNDCEKSSVGSNLSLDGISDASLSSPFDSPLPISDHPQNVSNTTGKNNNISAGNSTTHSKERKLNKFQWLWKLGRNNGEFTLEKGSDASEAIKPANSCDDQSNTVPSSTANTHCSPLGYKGESTEQNMTDTMRNIGQSMLEHIQVIEKAFQQWGEGVSLDNMSENVVLGEERVTPMSALKELRKISNILSEI* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2524 825 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 38 328 IPR035969 -
Vra7g2524 825 MobiDBLite consensus disorder prediction 725 757 - -
Vra7g2524 825 MobiDBLite consensus disorder prediction 510 627 - -
Vra7g2524 825 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 303 443 IPR035969 -
Vra7g2524 825 MobiDBLite consensus disorder prediction 728 757 - -
Vra7g2524 825 MobiDBLite consensus disorder prediction 510 593 - -
Vra7g2524 825 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 756 - -
Vra7g2524 825 MobiDBLite consensus disorder prediction 654 691 - -
Vra7g2524 825 Pfam Rab-GTPase-TBC domain 114 188 IPR000195 -
Vra7g2524 825 Pfam Rab-GTPase-TBC domain 268 369 IPR000195 -
Vra7g2524 825 MobiDBLite consensus disorder prediction 654 693 - -
Vra7g2524 825 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 99 284 - -
Vra7g2524 825 ProSiteProfiles TBC/rab GAP domain profile. 33 368 IPR000195 -
Vra7g2524 825 SMART tbc_4 30 414 IPR000195 -
Vra7g2524 825 MobiDBLite consensus disorder prediction 594 620 - -
Vra7g2524 825 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 756 - -
Vra7g2524 825 Gene3D - 307 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2524 Vra-Chr7 45546399 45552452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2524 K18469 - gmx:100816501 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2524 7 45546399 45552452 Vra7g2524 7 45546399 45552452 ECH
Vra7g2524 7 45546399 45552452 Vra5g0342 5 3363194 3368211 PCT