Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2521 ATGGAGAAAAAAATAGTCCTCACCAGGCCATTCTCATTGGAGAGGCAATCAGATGAGGAAACAAATCCTAAAGCTCCAAACATTTTGCGCCGCATACTTAGTCTCTTTAAGAATGTCCGCCCAGGATCCGATGTCTCTTGCTTCAAGCTTCCACCTGAGTTCAACATGCCCAAGTCAGAACTTCAGTGCTATGCAGAGTCCGTATATTCCACAGCATTAGACATCCTAAGCAACATTAACAATGGCAACACACCATTGGATAGACTCATAAATGTTGTAGCATGGACCATTTCTACTGTGCGCCCCTTTTGGGTTGGTGTTGCACCCTACAATCCCACTCTTGGTGAGACTCACCATGTTTCCAAAGGAACCCTCAATGTCTTACTGGAACAGGTTTCACATCACCCTCCCGTGTCTGCTCTCCATGCAACTGATTATAAGGAGAAGATAGAAATTATATGGTGCAACTCTACTGCTCCAAAATTCACTGGTACTTCAGTAGAAGTTCATGTGCATGGCATACGACAGTTGAAGCTCCACAATCATGGAGAGACCTATGAAATGAATTCTCCTAACCTCCTTATCAGAATTTTCCCAGTACCTGGAGTTGATTGGATTGGCAATGTCACTATCCGGTGCATAGAAACAGGCCTCGTGGCAGAATTAAGCTACGTTAGCCAATCTTTCTTTGGGTTTGGTTCAAATCAGAGACTGGTTAAAGGGAAAATCTTTGATTCATTATCTAAGAAAATTCTGTATAAAATTGAAGGTCATTGGGAAAGTACTGTAACAGTGAAGAATACAGACACTGCACAGGTAAGAGTGATCTATGATGCAAAACAAGTTATATCAGGACTCCAAGCTCCTATCGTCAAGGATCCAGAGAGTGTGTGGCCAACAGAAACGGCTCATGTTTGGAGTGAGTTGAGCGAAGCCATCTTAAGCAAAAAGTGGGAAAAAGCAAAAGAAGCAAAGAAAATAATAGAAGAAAGACAGAGGGAGCTTCGAAGAGAAAGAGAATCAAAGGGAGAAAAATGGGTTCCTAAACACTTTACGGTGTCATACAACAAAGAAAAGGGTTGGAACTGTTCACCAATTAAAAGTTCGGTCCCAAATGCTCCTATCATCTCCTTGTAA 1137 0.4213 MEKKIVLTRPFSLERQSDEETNPKAPNILRRILSLFKNVRPGSDVSCFKLPPEFNMPKSELQCYAESVYSTALDILSNINNGNTPLDRLINVVAWTISTVRPFWVGVAPYNPTLGETHHVSKGTLNVLLEQVSHHPPVSALHATDYKEKIEIIWCNSTAPKFTGTSVEVHVHGIRQLKLHNHGETYEMNSPNLLIRIFPVPGVDWIGNVTIRCIETGLVAELSYVSQSFFGFGSNQRLVKGKIFDSLSKKILYKIEGHWESTVTVKNTDTAQVRVIYDAKQVISGLQAPIVKDPESVWPTETAHVWSELSEAILSKKWEKAKEAKKIIEERQRELRRERESKGEKWVPKHFTVSYNKEKGWNCSPIKSSVPNAPIISL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2521 378 Gene3D - 298 372 - -
Vra7g2521 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Vra7g2521 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Vra7g2521 378 Coils Coil 318 341 - -
Vra7g2521 378 Gene3D - 111 288 - -
Vra7g2521 378 Pfam Oxysterol-binding protein 35 362 IPR000648 GO:0008289
Vra7g2521 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Vra7g2521 378 SUPERFAMILY Oxysterol-binding protein-like 32 363 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2521 Vra-Chr7 45517430 45521294 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2521 K22285 - gmx:100819769 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2521 7 45517430 45521294 Vra7g2521 7 45517430 45521294 ECH
Vra7g2521 7 45517430 45521294 Vra5g0346 5 3424199 3429154 PCT