Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2519 ATGGGGGCTTGTTTTTCTTGTGACTCATCCTCCATATTGAAGCATATCCGTGTGGTTCATATGAATGGTTATGTGGAGGATTTTGAGCAACCCATTTCAGTGAGGCAAGTGATTGGGCACCCCTCAAAACACTTTCTTTGCACTTCCACCCAGCTTCTTTCCGCTTCCTCAAAATCAATGACCGGAGAAACACACCTCCAACCTGGGCAAGTGTATTTCATGCTGCCATACTCAGTACTACAAGCTGATGTTTCTCCAGTGGACCTGGCTGCCCTTGTAAAGAGACTCAGCGCAGTAGCCAAAGCAACAAGTCCTTTGTCTACCCAAAATCAAACACTTTCGTCTTCACCTTCTACGACTCCTATCAGAGAGCAATATGGTGTTGGTAAGATGAACCTTGGTGTAAGAAGCCCTTGCAAAATACAACCATGGAAACCTGTCTTGGACACCATATCAGAGAAGCCATATCATAGGAGGAGTGAATCGGATTGGCAAGAAAGTTATTGA 507 0.4497 MGACFSCDSSSILKHIRVVHMNGYVEDFEQPISVRQVIGHPSKHFLCTSTQLLSASSKSMTGETHLQPGQVYFMLPYSVLQADVSPVDLAALVKRLSAVAKATSPLSTQNQTLSSSPSTTPIREQYGVGKMNLGVRSPCKIQPWKPVLDTISEKPYHRRSESDWQESY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2519 168 Pfam PADRE domain 1 153 IPR025322 -
Vra7g2519 168 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 164 - -
Vra7g2519 168 PANTHER OS06G0700300 PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2519 Vra-Chr7 45507566 45508308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2519 - - gmx:100785670 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2519 7 45507566 45508308 Vra7g2519 7 45507566 45508308 ECH
Vra7g2519 7 45507566 45508308 Vra5g0347 5 3431233 3432173 PCT