Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0347 ATGGGAGCCTGTTTTTCTTCCAAACCATCCTCCACAACCAACAATGTCCGTTTGGTTCATCTCAGTGGATATGTGGAGGATTTTGAGAAGCCAATTTCTGTGAGCCAACTCACTGGCACCTCTCAGAAGCACTTTGTTTGTACCTCACTTCAGCTTCTTTCACCTTGCTCAAAACCATTGAATGGAGACACAGAACTTCAACCTGGGAATGTCTACTTCATGCTACCATACTCAATCCTTCAAGCTGATGTTTCTCCTGTGGATTTGGCTTCCCTTGCAAAGAGGCTCACTGCAATAGCAAAAACCAGCAAAGGGTCTTCCCTCAAAGATGGTCCTTTCTCAAGCCAACAAGGGTTGAACGATGTTTGGAGTTCGCCTTCAAGGAGTCCTGGGAGGCTTGGTGTGGTTGAACGAAGTCCATGTAGAGTGCAGCCTTGGAAACCTATCTTGGACACCATCAGAGAGAAGTCTTTCAATCGGAGAAGTGAATCAGATTTGCAAGAACATATTTGA 513 0.4542 MGACFSSKPSSTTNNVRLVHLSGYVEDFEKPISVSQLTGTSQKHFVCTSLQLLSPCSKPLNGDTELQPGNVYFMLPYSILQADVSPVDLASLAKRLTAIAKTSKGSSLKDGPFSSQQGLNDVWSSPSRSPGRLGVVERSPCRVQPWKPILDTIREKSFNRRSESDLQEHI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0347 170 PANTHER OS06G0700300 PROTEIN 1 166 - -
Vra5g0347 170 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 166 - -
Vra5g0347 170 MobiDBLite consensus disorder prediction 104 127 - -
Vra5g0347 170 Pfam PADRE domain 1 155 IPR025322 -
Vra5g0347 170 MobiDBLite consensus disorder prediction 104 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0347 Vra-Chr5 3431233 3432173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0347 - - gmx:100810460 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0347 5 3431233 3432173 Vra5g0347 5 3431233 3432173 ECH
Vra7g2519 7 45507566 45508308 Vra5g0347 5 3431233 3432173 PCT