Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2511 ATGTCTGTTTCTATGAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGCCAAAAGGATGGACTTGAAATATGGCGTATCGAGAATTTTAATCCAGTTCCTATTCCTCAGTCATCTTATGGAAAGTTTTTCACTGGGGATTCTTATATGATCTTGAAGACAACTGCTTCAAAAAGTGGTGCTCTGCGTTATGATATCCATTATTGGCTTGGTAAAGAGACCAGTCAGGATGAGGCTGGTACTGCAGCCATCAAGACAGTCGAGTTGGATGCAGCTCTGGGAGGACGGGCTGTTCAGTATCGTGAAGTACAAGGCCACGAAACTGAAAAGTTCCTCTCTTATTTCAAACCATGCATCATACCTCAAGAAGGTGGAGCTGCCTCTGGTTTTAAACATGTGGAGGCCGAAAAACATAAGACACGGTTGTTTGTATGCAAAGGGAAACATGTGGTACATGTCAAAGAGGTTCCATTTGCTCGATCTTCGCTAAACCATGATGATGTTTTTATTCTGGATACTGAGTCCAAAATTTTCCAATTTAATGGTTCCAACTCATGTATTCAAGAAAGGGCCAAAGCATTGGAGGTTGTACAGTTTATTAAGGATACCTACCATGATGGGAAATGTGAGATAGCTTCCGTTGAGGATGGAAAGTTGATGTCTGATTCTGAAAGTGGAGAATTCTGGGCTTGCTTCGGGGGCTTTGCTCCTCTTCCACGGAGAACAGTCAGTGATGATGATAAGTTTGCTGATTCTCATCCTCCAGAACTACTTTGTGTTGGCAAGGGGAAGACAGAACCTGTTGAAACTGATTCCTTGACAAAGAAATTGCTGGAGACAAACAAATGCTATATTTTAGATTGTGGGTTGGAGGTTTATGTATGGATGGGAAGAAACACATCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATAAGTTAGTCAGTGGCACTGGTCGACCAAAGTCCCATATAGTTCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCGGGCATCTCAAATGATGTCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGTCTCTTAAAATCTGAACCTGTAAAAGAAGAACCTCAACCCTATATAGATTGCACAGGACATTTGCAGGTTTGGCGTGTTAATGGCAAGGAAAAGATTCTTCTTCCAGCCACTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAATATTCATATCCTGGAGAAGATAAGGAAGAACATCTTATAGGAACATGGGTTGGAAAGACCAGTATTGAGGAAGAGAGGGCTTCAGCTCTTTCACTGGCAAACAAAATGGTTGAGTCAATGAAGTTTCTTCCTTGCCAGGTTCGTATCTATGAAGGCAGTGAACCAATTCAGTTCCATGCCATCCTCCAAAGCTGTATTGTCTTCAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCAGAGAAGGAAATTCCAGATGAGACATACAGTGAGGATGGTCTTGCATTATTCCGCATCCAGGGTTTTGGGCCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCCTTGAATTCCACTTACTGCTACATACTTCATAGTGATTCAACTGTTTTTACGTGGTCTGGAGGTTTAGCAACTTCAGATGATCAAGAGCTTGTTGACAGAATGCTGGATTTGATTAAGCCGGACTTACCATGCAAATCACATAAGGAAGGCGTAGAATCGGAGTTGTTTTGGGATTTGTTGAGAGGAAAATCAGAATATCCCAGTCAAAAGATCGAGAGGGATGAAGAAAGCGACCCTCACCTATTTTCTTGCGACTTCTCAAAAGGAACTTTAAAGGTGAAAGAGATATACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTGCATCTTGGATTGTCACTCTGAAATCTTCGTCTGGGTTGGCCAGCAGGTTGACCCAAAGAGTAAAATACAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGACTTTCTTCTAGAAAATTTATCTCGTGAAGCTCCAATATATATTGTCATGGAAGGCAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGAGTCTGCAAAATCTGCAATGCTGGGAAACTCGTTTCAAAGGAAGCTTGCAATCCTCAAAAATGGGGGAGCGGCACTCGTACTTAAACATAAGCGAAGAGCATCAGTATCTTATGGGGGAAGGTCTGGTGGTGTGCCAGATAAATCTCAGCGTTCCCGTAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGCAGATCTCCAGCCTTTAATGCTCTAGCAGCTAATTTTGAGAACACAAATACGAGGAACCTTTCAACTCCACCTCCAATGGTTAGAAAACTGTACCCAAAATCTGGGGCACAGGATACAGCGAAACCGGCATCTAAATTTTCAGCCATATCTCATCTTACTTCTAGTTTTGAACTACCATCAGCTCGAGAAAATTTGATTCCTCGGTCCCAAAAAGTGGGTTCAGTTACCACCATATCAAACCCGGAGACAACTGACGTGGGGGTTTCTATGAGCAAGAGAATAGAATCTCTTACCATAAAGGAGGATGTGCAAGAGGGTGAAGCTGAAGATGATGAAAGTCTCCCAGTTCACCCATATGATCGCATTAACACAGATTCTACAGATCCTATAACAGATATTGACGTTACTAAACGAGAGGCTTATTTGTCACCTGCCGAGTTCCAAGAGAAATTAGGGATGGCTAAGAATGAATTTTACAAGTTACCAAAATGGAAACAGAACAAACTCAAGATGGCAGTTCGCTTATTCTGA 2880 0.4208 MSVSMRDLDPAFKGAGQKDGLEIWRIENFNPVPIPQSSYGKFFTGDSYMILKTTASKSGALRYDIHYWLGKETSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEKHKTRLFVCKGKHVVHVKEVPFARSSLNHDDVFILDTESKIFQFNGSNSCIQERAKALEVVQFIKDTYHDGKCEIASVEDGKLMSDSESGEFWACFGGFAPLPRRTVSDDDKFADSHPPELLCVGKGKTEPVETDSLTKKLLETNKCYILDCGLEVYVWMGRNTSLDERKSASGAADKLVSGTGRPKSHIVRVIEGFETVMFKSKFDSWPRASQMMSEDGRGKVAALLKRQGLDVKGLLKSEPVKEEPQPYIDCTGHLQVWRVNGKEKILLPATDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWVGKTSIEEERASALSLANKMVESMKFLPCQVRIYEGSEPIQFHAILQSCIVFKGGLSDGYKNYIAEKEIPDETYSEDGLALFRIQGFGPDNMQAIQVEPVASSLNSTYCYILHSDSTVFTWSGGLATSDDQELVDRMLDLIKPDLPCKSHKEGVESELFWDLLRGKSEYPSQKIERDEESDPHLFSCDFSKGTLKVKEIYNFSQDDLMTEDICILDCHSEIFVWVGQQVDPKSKIQALTIGEKFLEHDFLLENLSREAPIYIVMEGSEPPFFTRFFKWESAKSAMLGNSFQRKLAILKNGGAALVLKHKRRASVSYGGRSGGVPDKSQRSRSMSVSPDRVRVRGRSPAFNALAANFENTNTRNLSTPPPMVRKLYPKSGAQDTAKPASKFSAISHLTSSFELPSARENLIPRSQKVGSVTTISNPETTDVGVSMSKRIESLTIKEDVQEGEAEDDESLPVHPYDRINTDSTDPITDIDVTKREAYLSPAEFQEKLGMAKNEFYKLPKWKQNKLKMAVRLF* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2511 959 Gene3D Severin 7 132 IPR029006 -
Vra7g2511 959 PANTHER VILLIN 1 959 IPR007122 GO:0051015
Vra7g2511 959 Gene3D Severin 133 247 IPR029006 -
Vra7g2511 959 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Vra7g2511 959 SMART VHP_1 924 959 IPR003128 GO:0003779|GO:0007010
Vra7g2511 959 CDD gelsolin_S4_like 385 484 - -
Vra7g2511 959 Gene3D Severin 520 611 IPR029006 -
Vra7g2511 959 CDD gelsolin_S5_like 519 607 - -
Vra7g2511 959 SMART VILL_6 391 488 IPR007122 GO:0051015
Vra7g2511 959 SMART VILL_6 19 117 IPR007122 GO:0051015
Vra7g2511 959 SMART VILL_6 254 344 IPR007122 GO:0051015
Vra7g2511 959 SMART VILL_6 137 234 IPR007122 GO:0051015
Vra7g2511 959 SMART VILL_6 516 605 IPR007122 GO:0051015
Vra7g2511 959 SMART VILL_6 622 718 IPR007122 GO:0051015
Vra7g2511 959 Pfam Villin headpiece domain 924 959 IPR003128 GO:0003779|GO:0007010
Vra7g2511 959 Gene3D Severin 379 519 IPR029006 -
Vra7g2511 959 PANTHER VILLIN-4 1 959 - -
Vra7g2511 959 SUPERFAMILY Actin depolymerizing proteins 129 247 - -
Vra7g2511 959 SUPERFAMILY Actin depolymerizing proteins 509 614 - -
Vra7g2511 959 ProSiteProfiles Headpiece (HP) domain profile. 894 959 IPR003128 GO:0003779|GO:0007010
Vra7g2511 959 SUPERFAMILY VHP, Villin headpiece domain 885 959 IPR036886 GO:0003779|GO:0007010
Vra7g2511 959 SUPERFAMILY Actin depolymerizing proteins 381 525 - -
Vra7g2511 959 MobiDBLite consensus disorder prediction 754 779 - -
Vra7g2511 959 SUPERFAMILY Actin depolymerizing proteins 594 716 - -
Vra7g2511 959 CDD gelsolin_S3_like 260 343 - -
Vra7g2511 959 CDD gelsolin_S6_like 620 717 - -
Vra7g2511 959 CDD gelsolin_S1_like 12 124 - -
Vra7g2511 959 Gene3D Severin 612 733 IPR029006 -
Vra7g2511 959 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 410 426 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 435 453 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 468 488 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 531 551 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 591 610 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 643 665 IPR007122 GO:0051015
Vra7g2511 959 PRINTS Gelsolin family signature 672 691 IPR007122 GO:0051015
Vra7g2511 959 MobiDBLite consensus disorder prediction 885 913 - -
Vra7g2511 959 CDD gelsolin_S2_like 138 232 - -
Vra7g2511 959 Pfam Gelsolin repeat 150 217 IPR007123 -
Vra7g2511 959 Pfam Gelsolin repeat 28 111 IPR007123 -
Vra7g2511 959 Pfam Gelsolin repeat 265 337 IPR007123 -
Vra7g2511 959 Pfam Gelsolin repeat 638 711 IPR007123 -
Vra7g2511 959 Gene3D Severin 248 357 IPR029006 -
Vra7g2511 959 Gene3D Villin headpiece domain 897 959 IPR036886 GO:0003779|GO:0007010
Vra7g2511 959 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 426 IPR036180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2511 Vra-Chr7 45391039 45405954 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2511 - - gmx:100807762 1709.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2511 7 45391039 45405954 Vra7g2511 7 45391039 45405954 ECH
Vra7g2511 7 45391039 45405954 Vra5g0404 5 4203083 4205565 PCT