Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0404 ATGCAAAATTCTTGTTCTTTGTATGAAAAAATGGGGTACTCAAATGCACCCAGGGCGTACTACTCCACTCTGCACGATTCAATCACCTCTCTGTGCAAGACCATTCTTCCGTTAGGCCTCAAGAAAAGGTGTTTGGTTTCCGCAGAGCACAGACTGTGGAAACTTCAATCCGACAACCTCAAATGGCAGCAAGACTCTCTCCATCAGATTCTCAACTTGTTGGCTCTACACAAAGATGACATCCTCTCTGAAGATGAGGTTTCGGCTTTCAGGGCCCATTTGCTTGATACCCTTCTTGCTTCTCCCCCTCCAGAACAGGATCATGCCTCCATCATCAAAGACAAGCTTATGTTCTTACAGGAACTTCTTCATGCCAAATGCATTTCTGAAGGAGAGTATCAATCTTCAAGAAGGCCTTTGCTTGTGAGATTGGCAGTTCAAGGAGGTGAGATTGAAGGCAGGGAAGTGATCAATGCAGGGCTGGCAGACACCAAAGAAAATCCTGAGGAAGAATGGTCAGATATTGACTTGAAGGATGATCAGTGCTTGATGAACAAAGAGAATTCAAATTCCAAGAAGACATCAAAGCAGCCAAGGAAGCAGGTTATGAAAGGAGCAACTTCGGTTTTAAGCTTTGGATCTCCTTTCAAACCTGGGAAAAACTCAATGGAGAAGAGCATATTCAATTCACCTACTTTGCACATGCACTCAGCGCAATCAAAAGTCTCTTCTTCCTCTATCTTTACCCAAAGTGAATTGAGGCATCCTAAGGAAAACAAACCCTTCAGGGATGGATCAGAGAAGATGAAGAGGAAGCCATTTAGAGCTCTATTTCATAGGGATAAAAATAAGAAAGAGGGGCATGGTGGTGGTGGAGATCATCATGGTCTTGAGGCAGAGAAATCAGCAAAAAAACAATGGGGGTTTGATGGGTTGAGGAAAGGCAAGAAAAGTGACGCAGATGATGACACAGTTCCTTTGTCTCTAAATGAGAGGTCTGATAGTGAGGCCTACTTGCCTTCCTATCAGCATTTTTCAAGAGCACACGGTGAGGTGTCTCTGATGAACAAGTTGCAGCCTGATGAATCACCATCTGTTTTTTCCGTGGATGACAAGGTTTCGGAGGAGTATGTAAAGAAGAAGCTGTCAAGAATGCCTACAGAAATGAGGAGCACAAACACAAATCTATACTTCTCACCAAGGTGTGATCGGCAGAGCGAAGAAGACAGGCACAATGATGCAGAAGTGAAACATGAAAACTCGATGGGGTGGACAACATTTGAAGACGAGGAAAATCTTCACCCTAACCTTTTTGTTAACCATGGTTAG 1329 0.4372 MQNSCSLYEKMGYSNAPRAYYSTLHDSITSLCKTILPLGLKKRCLVSAEHRLWKLQSDNLKWQQDSLHQILNLLALHKDDILSEDEVSAFRAHLLDTLLASPPPEQDHASIIKDKLMFLQELLHAKCISEGEYQSSRRPLLVRLAVQGGEIEGREVINAGLADTKENPEEEWSDIDLKDDQCLMNKENSNSKKTSKQPRKQVMKGATSVLSFGSPFKPGKNSMEKSIFNSPTLHMHSAQSKVSSSSIFTQSELRHPKENKPFRDGSEKMKRKPFRALFHRDKNKKEGHGGGGDHHGLEAEKSAKKQWGFDGLRKGKKSDADDDTVPLSLNERSDSEAYLPSYQHFSRAHGEVSLMNKLQPDESPSVFSVDDKVSEEYVKKKLSRMPTEMRSTNTNLYFSPRCDRQSEEDRHNDAEVKHENSMGWTTFEDEENLHPNLFVNHG* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0404 442 MobiDBLite consensus disorder prediction 234 252 - -
Vra5g0404 442 MobiDBLite consensus disorder prediction 393 428 - -
Vra5g0404 442 MobiDBLite consensus disorder prediction 253 328 - -
Vra5g0404 442 MobiDBLite consensus disorder prediction 234 328 - -
Vra5g0404 442 MobiDBLite consensus disorder prediction 181 204 - -
Vra5g0404 442 PANTHER OS09G0556800 PROTEIN 408 441 - -
Vra5g0404 442 PANTHER OS09G0556800 PROTEIN 11 399 - -
Vra5g0404 442 MobiDBLite consensus disorder prediction 402 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0404 Vra-Chr5 4203083 4205565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0404 - - gmx:100814752 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2511 7 45391039 45405954 Vra5g0404 5 4203083 4205565 PCT
Vra7g2339 7 43493204 43495746 Vra5g0404 5 4203083 4205565 PCT