Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2429 ATGGTTCGCTTCAGCAACAACATTATCGGACTCCTCAATTTCCTCACCTTCCTCCTCTCCATCCCGATCCTGGGAGGCGGAGTGTGGCTCACCAAGCACGCCAGCACCGAGTGCGATCGCTGGCTGGAGAAGCCCGTGATCGCAATCGGTGTTTTCTTAATGGTCGTTTCACTCGCTGGCCTCATCGGCGCGTGCTGTCGCGTGACATGGCTCCTCTGGCTCTACCTGCTCGTCATGTTCTTGCTCATCGTTATTCTCTTTGCCTTCACCATCTTCGCCTTCGTTGTCACCAACAAGGGCGCTGGTGAGGTCGTGTCTAACAGAGGCTATAAGGAGTATAGGCTCGGGGATTACTCCAATTGGTTGCAGAAAAGGGTGAACAACCAGAACACGTGGAACAGGATCAAGAGTTGCTTACAGTCTGGGAAAGTCTGTACTGAATTCCAAAACAAGTTCCTAAACGACACCGTTACTGAGTTCTACACTGAGAACCTCTCCGCGCTTCAGTCCGGGTGTTGTAAGCCTGCTGATGAGTGCAATTTTATCTATGTGAATCCAACTACGTGGACAAAGACCGCAAATGCTACTCTTAACAACCCTGACTGTAGTGCTTGGGATAACGATCCCAACAAACTGTGCTTCGATTGCCAATCATGCAAGGCTGGCTTACTGCAAAACCTGAAGACTGATTGGAAGAAGGTGGCTGTTATTAACATCGTAGTCCTGGTCTTCCTCGTTATTGTCTACTCCATAGGTTGTTGTGCTTTCAGGAATAACAGGCAGGAGAATTGGAAGAGATATTAG 804 0.4925 MVRFSNNIIGLLNFLTFLLSIPILGGGVWLTKHASTECDRWLEKPVIAIGVFLMVVSLAGLIGACCRVTWLLWLYLLVMFLLIVILFAFTIFAFVVTNKGAGEVVSNRGYKEYRLGDYSNWLQKRVNNQNTWNRIKSCLQSGKVCTEFQNKFLNDTVTEFYTENLSALQSGCCKPADECNFIYVNPTTWTKTANATLNNPDCSAWDNDPNKLCFDCQSCKAGLLQNLKTDWKKVAVINIVVLVFLVIVYSIGCCAFRNNRQENWKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2429 267 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
Vra7g2429 267 PRINTS Transmembrane four family signature 7 30 - -
Vra7g2429 267 PRINTS Transmembrane four family signature 39 65 - -
Vra7g2429 267 PRINTS Transmembrane four family signature 66 94 - -
Vra7g2429 267 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Vra7g2429 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Vra7g2429 267 PANTHER BNAA09G41810D PROTEIN 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2429 Vra-Chr7 44431174 44433785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2429 1 263 Miscellaneous Gene Families AT2G23810 68.441 5.15e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2429 - - gmx:100819507 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2429 7 44431174 44433785 Vra7g2429 7 44431174 44433785 ECH
Vra7g2429 7 44431174 44433785 Vra5g0381 5 3941668 3943501 PCT