Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0381 ATGTTCAGGGTGAGCAACAATCTTGTTGGGGTGCTGAATCTGCTGGCTTTCCTTCTCTCGATTCCCATTTTAGTGACGGGCGTGTGGCTGAGCAAGCAAGCGAACACGGAGTGCGAATGGTGGCTGCAAAGAATCTTCATTGTGCTGGGCGTTTTCCTTCTGGTGGTGTCTCTGGCAGGTCTTGTCGGCGCATGTTGTCGTGTCTCATGTCTCCTCTGGCTTTACCTCTTCGTCATGTTCCTGCTCATACTCCTTGTTCTTTCTTTCACCATCTTCGCCTTCGTCGTCACCAACAAGGGTGCCGGTCAAGTCCTTTCCAACCGAGGCTACAAGGAGTACAGGCTCGGTGACTACTCCAACTGGTTTCAGAACAGAGTCAACAACGCTCACAACTGGAACCGAATTCGGAGCTGTCTCCGATCTTCCAAACTCTGCTCCCAATTTCAAACCCAATTCGCCAACGACAATCTGCAAAAGTTCTACGCTGAGAGCTTGTCTTCGCTTCAGTCCGGGTGTTGCAAGCCATCAGACAGCTGCAACTTTGAGTACCAGGGTCCATCTGTCTGGAAAAAGACTGAAAGTGCAAATTATTCGAACCCTGACTGTAATGCTTGGGACAATGATCCCAATGTTCTGTGCTTCAATTGCCAAACTTGCAAGGCTGGGTTCCTGCAGAGCCTTAAGACTGACTGGAAGAAGGTGACAATTGTTAATGTCATATTCCTCATCTTCCTCATCATTGTGTACTCTGTTGGTTGCTGCGCATTCCGGAATAACTTGAGAGATAATTGGAAGCGCTAG 801 0.4881 MFRVSNNLVGVLNLLAFLLSIPILVTGVWLSKQANTECEWWLQRIFIVLGVFLLVVSLAGLVGACCRVSCLLWLYLFVMFLLILLVLSFTIFAFVVTNKGAGQVLSNRGYKEYRLGDYSNWFQNRVNNAHNWNRIRSCLRSSKLCSQFQTQFANDNLQKFYAESLSSLQSGCCKPSDSCNFEYQGPSVWKKTESANYSNPDCNAWDNDPNVLCFNCQTCKAGFLQSLKTDWKKVTIVNVIFLIFLIIVYSVGCCAFRNNLRDNWKR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0381 266 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Vra5g0381 266 PRINTS Transmembrane four family signature 7 30 - -
Vra5g0381 266 PRINTS Transmembrane four family signature 39 65 - -
Vra5g0381 266 PRINTS Transmembrane four family signature 66 94 - -
Vra5g0381 266 PANTHER TETRASPANIN-8 1 263 - -
Vra5g0381 266 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
Vra5g0381 266 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0381 Vra-Chr5 3941668 3943501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0381 1 264 Miscellaneous Gene Families AT4G28050 63.636 4.11e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0381 - - pvu:PHAVU_009G207500g 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2429 7 44431174 44433785 Vra5g0381 5 3941668 3943501 PCT