Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2345 ATGTTCTTCCCTCTGCCCTCTGATCTGACGAAAAACCGTCCACAAATGGAGTCTTGTCGTGGATTTAGAATGTGGGCATTCGTTTTGATGTGTTTAATGTTTCAATCGGGAAATGGGTTTTACCTCCCGGGTAGTTACCCTCACAAGTATGGCATTGGGGATGAGTTGTGGGTGAAGGTGAATTCTCTCACTTCAATTGACACAGAAATTCCGTTTAGTTATTACAGTCTACCTTTCTGTAAGCCTGAAGGTGGTGTTAAGGACAGTGCTGAGAATCTGGGTGAACTCCTTGTGGGGGATCGGATCGAGAACTCGCCCTACAGGTTTAAGATGTACACCAATGAGTCTGAGATATTTTTGTGTCAACTGGAAAAGCTCTCCGATGATCAGTTTAATATTTTGAAGAAGAGGATTGATGAGATGTATCAGGTTAATTTGTTACTTGATAATTTGCCTGCCATTAGGTTTACCAAGAAGGAGGACTACATGTTGAGGTGGACTGGGTACCCTGTCGGTATCAAGATTCAGGATGTGTATTATCTGTTCAACCATCTGAGGTTTAATGTTCTTGTCCATAAGTACGAGGAGACCAATGTGGCACGTGTTATGGGGACCGGTGATGCGGCTGAATTGATTCCCACGATTGGTAAGGAGGGATCTGACAAGCCTGGTTACATGGTTGTTGGGTTTGAGGTGATACCCTGTAGTATTCTGCACAATGCTGATTCGGTTAAAGGAATGAACATGTATAGCAAATACCCCTCACCTATCAAATGTGATCCCTCCACAGTGGCCATGCCAATCAGGGAGGGGCAGCCGGTTACATTTACATATGAGGTCACCTTTGAGGAGAGTGATATCAAGTGGCCTTCTAGATGGGATGCCTACTTGAAAATGGAGGGTGCCAAAGTTCACTGGTTCTCGATCCTGAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTTATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGATATGAGGAGCTTGATAAGGAGGCACAGGCACAGATGAACGAGGAGTTATCTGGTTGGAAGCTTGTTGTGGGAGATGTTTTCCGCGCACCAACAAATTCTGCTTTGTTGTGTATAATGGTTGGGGATGGAGTTCAGATTCTGGGGATGGCTGTTGTGACAATTCTTTTTGCTGCACTTGGATTCATGTCACCAGCATCTCGCGGAACACTCATCACAGGTATGCTGTTTTTCTACATGATACTTGGTGTAGCTGCTGGTTATGTTGCAGTTCGGCTATGGAGGACGATTGGCTATGGTGATAAAAAGGGATGGATTTCAGTGGCATGGAAGGCTGCTTGTTTCTTCCCCGGTATTGCCTTTTTTATCCTGACAACCTTAAACTTCCTATTATGGGGAAGCCACAGCACAGGAGCGATTCCATTTTCACTGTTTGTTATTCTGATTTTGCTCTGGTTCTGCATTTCTGTTCCCCTTACTCTTATCGGTGGCCTGTTTGGAGCAAGGGCACCTCACGCTGAGTATCCAGTTCGAACGAACCAAATCCCTCGAGAAATTCCCAAGCAGAAATACCCATCATGGCTCATGGTTCTGGGCGCCGGCACCCTTCCATTTGGTACCTTGTTCATCGAGCTCTTCTTCATCATGTCCAGTATATGGATGGGTCGTGTTTACTATGTGTTTGGATTTCTCTTAATTGTCTTGATCCTTCTTGTGGTGGTGTGTGCTGAGGTATCTCTAGTTCTAACCTACATGCACCTGTGTGTGGAGGACTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTACCTTGTATTTGACCTCAAGAATCTCAATGGCCCTGTTTCTGCAACTCTTTACTTGGGATATTCCTTATTCATGGTTCTTGCAATCATGTTGGCTACAGGCACGGTTGGATTCCTTTCCTCCTTCTGGTTCGTCTATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 2022 0.4481 MFFPLPSDLTKNRPQMESCRGFRMWAFVLMCLMFQSGNGFYLPGSYPHKYGIGDELWVKVNSLTSIDTEIPFSYYSLPFCKPEGGVKDSAENLGELLVGDRIENSPYRFKMYTNESEIFLCQLEKLSDDQFNILKKRIDEMYQVNLLLDNLPAIRFTKKEDYMLRWTGYPVGIKIQDVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAELIPTIGKEGSDKPGYMVVGFEVIPCSILHNADSVKGMNMYSKYPSPIKCDPSTVAMPIREGQPVTFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPTNSALLCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGYGDKKGWISVAWKAACFFPGIAFFILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGLFGARAPHAEYPVRTNQIPREIPKQKYPSWLMVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLLIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLNGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2345 673 Coils Coil 328 348 - -
Vra7g2345 673 Pfam Endomembrane protein 70 71 625 IPR004240 GO:0016021
Vra7g2345 673 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 20 673 IPR004240 GO:0016021
Vra7g2345 673 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 20 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2345 Vra-Chr7 43550547 43553141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2345 16 673 Miscellaneous Gene Families AT5G35160 83.915 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2345 K17086 - gmx:100802084 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2345 7 43550547 43553141 Vra7g2345 7 43550547 43553141 ECH
Vra7g2345 7 43550547 43553141 Vra5g0396 5 4115432 4118193 PCT