Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2297 ATGAACAGTACTACTCACACCAAATGCGTCGTCAAGCGCAAACCCAAAGAAACTGATGAAACCTTCTCTTTTACACAGTCCAAACAGACCATGAAGAAGAACCTCTGCGACCGTCACAGACCAAAACGCTACCCTCTCCTGTCGTTTTGGGAGCTGCCGGACTACATGAAAGACAACGAATACATTCTGCGTTATTACAGGGTCAATTGGCCCTTCAAACAAGCTCTCTTCAGCCTCTTTCGCTGGCACAACGAGACCATAAATGTTTGGACCCATTTCATTGGGTTTTTACTCTTTCTTGGGTTGACTCTCGCCAATTTGATGAAGCCTCGTGTGGTGGATCTTTTGCAACTCCTAACCAGGTCTTTTTCTTCAAATGCGGAAAAAAATGTCTCTCATAACATCAAAGATTTGCTTCTGGGTACAACGGTACTGTTTGATTTAAATAATGAAATGCCTTTGACAGTCGAACTTCAATCGACAGCATTGGTTATAGCAAGGTGGCCATTCTTTGTTTTCCTAGGTGGTTCAATGTTCTGCCTCTTCTCTAGCAGCATGTGCCACCTCTTCTGTTGCCACTCCCACAACTTGAACATGTTCCTGTGGCGACTGGACTATGTAGGAATAGTTGTGATGATCATCACCTCCTTTTTCCCTCAAATTTACTACGTTTTCCTTTGTGAGCCTCACTGGCAAATCATGTATCTTGCTGGGATCACAGCCATGGGAGTGTTCACCATCGCAACAATGCTCTCCCCAACACTTTCCACCAGCAAATACCGTTCATTTCGTGCCATGTTGTTCTGCTCAATGGGACTTTTCGGCATTGTGCCTGCAATCCATGCATGCTTTGTGAATTGGACCAATCCCAGACGCAATATTACCTTAGCATATGAAAGTGGCATGGCATTATCTTACTTGACAGGGACCTTATTCTATGTGACAAGAATACCCGAAAGATGGAAGCCAGGCTGGTTCGATTTGGCAGGTCACAGCCACCAAATTTTTCATGCTCTTGTGGTGGTTGGAGCATTGTCACATTATGCAGCCACTCTTCAAATGCTGGAGTGGCGTGACTCTTTTGGGTGTGACACGCTTCCATGA 1104 0.4502 MNSTTHTKCVVKRKPKETDETFSFTQSKQTMKKNLCDRHRPKRYPLLSFWELPDYMKDNEYILRYYRVNWPFKQALFSLFRWHNETINVWTHFIGFLLFLGLTLANLMKPRVVDLLQLLTRSFSSNAEKNVSHNIKDLLLGTTVLFDLNNEMPLTVELQSTALVIARWPFFVFLGGSMFCLFSSSMCHLFCCHSHNLNMFLWRLDYVGIVVMIITSFFPQIYYVFLCEPHWQIMYLAGITAMGVFTIATMLSPTLSTSKYRSFRAMLFCSMGLFGIVPAIHACFVNWTNPRRNITLAYESGMALSYLTGTLFYVTRIPERWKPGWFDLAGHSHQIFHALVVVGALSHYAATLQMLEWRDSFGCDTLP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2297 367 Pfam Haemolysin-III related 80 348 IPR004254 GO:0016021
Vra7g2297 367 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 25 364 IPR004254 GO:0016021
Vra7g2297 367 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 1 25 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2297 Vra-Chr7 43060737 43063488 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2297 K07297 - gmx:100816825 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2297 7 43060737 43063488 Vra7g2297 7 43060737 43063488 ECH
Vra7g2297 7 43060737 43063488 Vra3g1148 3 12093823 12096737 PCT