Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1148 ATGGGGAAAAGGAGATTGGTGAGGTTTGAGGAGTTGCCGACGTACCTGAAAGACAACGAGTTCATCTTGGATCATTACCGGTCGGAATGGTCCGTGAAGGAGGCATTGTTGAGCGTCTTCATGTGGCACAACGAAACGCTCAATGTTTGGACGCATTTGGTTGGGTTTCTTATATTTGCGGCGTTGGCAATGCTCGGATGTTGTTTTCCGAGTGTTTTCAGGGTAGGGGCGATTGAGATGGAGCTGTTCATTATGGGAAAGGAATTCAATGGTTCTCTTCCGGTCACTACTGGATTCTTGAATTCGAATTTGAGCTACTTATTGGTACCATCTATGATTCCTGACCTGGGAGATGGCGCAGAAGCAGAAACAATTCCTAGATGGCCGTGGTTTGTTTTCTTAGCTGGAGGAATGGGCTGCTTGGCTTTCAGTAGTATTTCTCATCTAATGGCATGTCACTCAAAATGCTTCAACCTTTTTTTCTGGCGTCTAGATTATGTAGGAATTTCTCTCATGATAGTTTGCTCCTTCTATGCTCCAATTTACTATGTCTTTTTCTGCAATCCTCACATAAGGACATTCTACTTGACCTCAATAACTGCGTTTGGAGTCCTCACCACCATCACCCTTCTCGCCCCTTCACTTTCTTCCCCTCACCTGCGACCCTTCAGAGCTTGTTTATTTCTCTCCATGGGATTTTCAGGTGTCATTCCTGCAGTTCATGTTCTTGTGACACATTGGGAGCACCCACAGGTTGTTGTTGCACTAGGATTTGAGCTTCTAATGGCCATTCTATATGCCACTGGAGCTGTGTTCTATGTCACTAGAATACCAGAGCGATGGAAGCCTGGGGCATTTGATATTGCAGGTCATAGTCATCAGATTTTTCATGTTTTTGTTCTTCTTGGGGCGCTTGCACATACTCAAGCCACGCTGCTAGTCATGGAATTTCGAAGGAGATCGCCCACATGTGCATTTTAG 981 0.4526 MGKRRLVRFEELPTYLKDNEFILDHYRSEWSVKEALLSVFMWHNETLNVWTHLVGFLIFAALAMLGCCFPSVFRVGAIEMELFIMGKEFNGSLPVTTGFLNSNLSYLLVPSMIPDLGDGAEAETIPRWPWFVFLAGGMGCLAFSSISHLMACHSKCFNLFFWRLDYVGISLMIVCSFYAPIYYVFFCNPHIRTFYLTSITAFGVLTTITLLAPSLSSPHLRPFRACLFLSMGFSGVIPAVHVLVTHWEHPQVVVALGFELLMAILYATGAVFYVTRIPERWKPGAFDIAGHSHQIFHVFVLLGALAHTQATLLVMEFRRRSPTCAF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1148 326 Pfam Haemolysin-III related 40 307 IPR004254 GO:0016021
Vra3g1148 326 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 2 4 320 - -
Vra3g1148 326 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 4 320 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1148 Vra-Chr3 12093823 12096737 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1148 K07297 - gmx:100809900 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2297 7 43060737 43063488 Vra3g1148 3 12093823 12096737 PCT