Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2291 ATGTCGGGTGGCACGCAGAAGAGTCTGAGAAAGGCACTTGGGGCACTTAAGGACACTACAACAGTCTCATTGGCTAAGGTCAACAGTGATTACAAGGAATTGGACATTTCTATAGTTAGAGCCACAAACCATGTTGAACGTCCAGCGAAGGAAAAACACATAAGAGCTATTTTTGCAGCTATCTCAGCTACAAGACCTAGAGCCGATGTTGCCTATTGCATCCATGCTCTTGCCCGGCGGTTATCAAAGACACATAACTGGGCAGTTGCTTTGAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCTACATTTCATGAAGAACTCATTAATTATGGGAGAAGTAGAAGTCATATGCTCAATATGGCTCATTTTAAAGATGATTCCAGTCCAAATGCATGGGATTATTCTGCATGGGTGCGCACTTATGCATTATTTTTGGAGGAGAGGCTGGAATGTTTTCGTGTGTTGAAGTATGACATTGAGGCAGACCGCCCTAGGACCAAAGATTTGGATACTGCAGAACTATTAGAGCAGTTGCCAGCTTTACAACAACTTCTTAATCGAGTTATTGGCTGCCAGCCACACGGGGCAGCTGTAAATAACTTTGTCATTCAGTTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGCACAGTCAATATGGTTGACAAGTTTTTTGAGATGCAACGCCATGATGCTCTGAAAGCTCTTGATATATACAGGAGGGTTGGGCAGCAGGCTGAGAGACTGTCAGAGTTTTATGAAATATGCCGTAATCTTGATGTTGGCCGTGGAGAGAAGTTTATTAAAGTCGAACAGCCCCCTTCATCATTTCTGCAAGCTATGGAAGAGTACGTCAAAGATGCTCCCCAGGGACCTATAGTTCGTAAGGATCAGCTTATTGAAAACAAAGAAGTTTTAGCTATTGAAGATAAAAAGACAACAGAAGTGCAGGAGGAACGTCCACCCTCACCTTCACCCTCACCTCCTCCACCTCCTCCTGCTGAACCTGTGAAAGTGGAAGCACCACCAGTGCAACCACCACCTGATCTATTGAATTTGGAGGATCCGGTTCCAGCTGCTTTAGAGTTGGAAGAGAAAAATGCATTGGCTTTAGCCATTGTTCCCATTGCCGTTGAACAACAGCCTTCTGCCGTTTCAAATCCAGCAAATGGAACTACAGGATGGGAGTTGGCACTTGTTACCGCTCCTAGTTCAAATGAGAGTGCTGCATCAGCTAGCAAACTGGCTGGAGGTTTGGACAAGCTTACTTTAGACAGTCTTTACGATGATGCACTCAGGAGAAACAACCAAAATGTCAGCTATAATCCATGGGAGTCAGCACCGGTGGGAAACACAGTGCAACCAACAATGCATGATCCATTTTTTGCATCTAATGCAGTTGCTGCTCCACATTCTGTTCAGATGGCTGCTATGTCCAACCAGCAGCAAGCTTTCATGTATCAGCAGCAGCAGCAAATGATGATGATGGCCCCTCAGCAACAATCAGTGAATCCTTTCGGAAATCCTTATGGAGCCAGTGTTCACCCCTATGGCTCAGGTATGCCTGTTCAATCATACAATCCATATACAGGTCTCATCTAG 1641 0.4436 MSGGTQKSLRKALGALKDTTTVSLAKVNSDYKELDISIVRATNHVERPAKEKHIRAIFAAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMAHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQLPALQQLLNRVIGCQPHGAAVNNFVIQLALSMVASESIKIYQAISDGTVNMVDKFFEMQRHDALKALDIYRRVGQQAERLSEFYEICRNLDVGRGEKFIKVEQPPSSFLQAMEEYVKDAPQGPIVRKDQLIENKEVLAIEDKKTTEVQEERPPSPSPSPPPPPPAEPVKVEAPPVQPPPDLLNLEDPVPAALELEEKNALALAIVPIAVEQQPSAVSNPANGTTGWELALVTAPSSNESAASASKLAGGLDKLTLDSLYDDALRRNNQNVSYNPWESAPVGNTVQPTMHDPFFASNAVAAPHSVQMAAMSNQQQAFMYQQQQQMMMMAPQQQSVNPFGNPYGASVHPYGSGMPVQSYNPYTGLI* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2291 546 CDD ANTH_N 34 157 - -
Vra7g2291 546 MobiDBLite consensus disorder prediction 320 365 - -
Vra7g2291 546 PANTHER OS06G0175500 PROTEIN 1 526 - -
Vra7g2291 546 SMART enth_2 32 164 IPR013809 -
Vra7g2291 546 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Vra7g2291 546 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Vra7g2291 546 Gene3D - 7 164 IPR008942 -
Vra7g2291 546 SUPERFAMILY GAT-like domain 169 300 - -
Vra7g2291 546 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 526 IPR045192 GO:0048268|GO:0072583
Vra7g2291 546 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Vra7g2291 546 MobiDBLite consensus disorder prediction 334 365 - -
Vra7g2291 546 Gene3D ANTH domain 165 319 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2291 Vra-Chr7 42998210 43003732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2291 K20043 - gmx:100800909 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2291 7 42998210 43003732 Vra7g2291 7 42998210 43003732 ECH
Vra7g2291 7 42998210 43003732 Vra3g1161 3 12251616 12264735 PCT