Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2258 ATGGTGATGATTACTGCTTGGATCGCTGACCTCTTCGCTTGTATGGGTGGTTGCTTTGGATGTTGTATGAAACCAACACCAATAATTGCTGTGGATGAGCCGGCAAAGGGACTAAGAATTCAGGGGCAGACAGTGAGAAAACCACATATATCAGATGGTTTCTGGAGTTCAAGTACTTGTGATCTGGATAATGGCAACATTCAATCTCAGAGAAGTATCTCGTCTGTCAGTACATTAAATCAAATTCTCTATCATAGTGGTGGAACTTCTACTACAGGCACCAATTCTGAATTTGTAAACCCAGGTCTTCTTCTCTGGAATGAAAGCAGGCTTCAGTGGATTGGAAGTGAAAAATCTAGCAAGCCTAGCCAACAAAAACGTGAACCCAGACTGAATTGGAATGCAACTTACGAAAGTTTGCTTGGGACTAGACAACCTTTCCCCAAGTCCATACCTTTATCTGAAATGGTGGAATTCCTGGTGGATGTTTGGGAACGTGAAGGGATGTATGGTTGA 516 0.4264 MVMITAWIADLFACMGGCFGCCMKPTPIIAVDEPAKGLRIQGQTVRKPHISDGFWSSSTCDLDNGNIQSQRSISSVSTLNQILYHSGGTSTTGTNSEFVNPGLLLWNESRLQWIGSEKSSKPSQQKREPRLNWNATYESLLGTRQPFPKSIPLSEMVEFLVDVWEREGMYG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2258 171 PANTHER DUF4050 FAMILY PROTEIN 3 170 - -
Vra7g2258 171 PANTHER OS07G0479600 PROTEIN 3 170 - -
Vra7g2258 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
Vra7g2258 171 Pfam Protein of unknown function (DUF4050) 131 170 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2258 Vra-Chr7 42531581 42535032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2258 - - pvu:PHAVU_003G165400g 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2258 7 42531581 42535032 Vra9g0093 9 587434 590486 ECH
Vra7g2258 7 42531581 42535032 Vra6g1567 6 30976421 30980334 ECH
Vra7g2258 7 42531581 42535032 Vra7g2258 7 42531581 42535032 ECH