Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1567 ATGTACAAAATCTTCTCTTCATTGACTTGTGCAAATGCAATTTGGTTTGGCGTCCATGGGGTGAGTTCTTTACTGTCTTTGTTGTTTGTCTTGGTTTGGCAGCTGAGAGAAAAAAAAAAGAGTTTCATCACAGAAATGTGTTCTAGGGGTTGCTTTCAAGCACCGTTGGTTAGATGCTATGTGAAGAAACCCTCATGTTCAGTGTTTTGTGGTGCTTGGTTTCGTGTTCTTGTGCTCTCTTTCATGGATAAGTTAAAGCTCAAATGCAAGGGGATTTTCTGTAACATAGGTTGTTTTGGATGCTGCAAAAAAACTCCAGGGATTACCTCAATGGATGAAGCTTCTAAAGGACTACGAGCTCAAGAACAAACAGTGACTAAAATGGAAGGATCAGATGGCTTCTGGAGCAGCAGTACTTTTGAATTAGACCACAGTGAAGGTCACTCGCAGAGAAGCATCTCATCAATAGGAATATCGAATAATCCTTCTGATCCTCGAAGTAGTGGAGGCAATCAAAGTGGTCTTCCTGAATTTGTCAACCATGGGCTTCTTCTCTGGAACCAGATAAGGCAACAATGGATAGGAAAGAAAGGGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCAACCTATGATACCTTACTTGGGAGCAACAAGCCCTTTCCCCAACGCATTCCTTTGAGAGAAATGGTTGACTTTCTTGTTGATATTTGGGATCAAGAGGGTTTGTATGACTGA 753 0.4117 MYKIFSSLTCANAIWFGVHGVSSLLSLLFVLVWQLREKKKSFITEMCSRGCFQAPLVRCYVKKPSCSVFCGAWFRVLVLSFMDKLKLKCKGIFCNIGCFGCCKKTPGITSMDEASKGLRAQEQTVTKMEGSDGFWSSSTFELDHSEGHSQRSISSIGISNNPSDPRSSGGNQSGLPEFVNHGLLLWNQIRQQWIGKKGSESITEIQEPRISSNATYDTLLGSNKPFPQRIPLREMVDFLVDIWDQEGLYD* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1567 250 Pfam Protein of unknown function (DUF4050) 138 206 IPR025124 -
Vra6g1567 250 Pfam Protein of unknown function (DUF4050) 210 250 IPR025124 -
Vra6g1567 250 MobiDBLite consensus disorder prediction 151 172 - -
Vra6g1567 250 PANTHER DUF4050 FAMILY PROTEIN 59 250 - -
Vra6g1567 250 PANTHER OS07G0479600 PROTEIN 59 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1567 Vra-Chr6 30976421 30980334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1567 - - pvu:PHAVU_001G051400g 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1567 6 30976421 30980334 Vra6g1567 6 30976421 30980334 ECH
Vra7g2258 7 42531581 42535032 Vra6g1567 6 30976421 30980334 ECH