Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2253 ATGAAATTCGGAAAGAGTCTCAGCAGCCAGATCGAGAAAACCTTGCCGGAGTGGCGCGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGCTTAAACAATTTGACCCTCCTGCTGCCGCCGATGACCGCCCCGGAAAACGCCACAAGTCTGATTCTGCACCCACTGCCGCCGACATGTCCAAGGAGGAGACCGACTTCCGTAACTTGCTCGAGAGTGAACTCGACAAATTCAACACCTTCTTCGTTGAGAAGGAGGAAGAATACATTATCAGACTCAAGGAGTTACAAGATAGGGTGGTCAAAGTTAAGGATTATAGTGAAGAGATGATGAAAATCCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTGAACTATACAGGGCTAGTGAAAATACTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATCCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACTGACTTGCTCTACAAGCTTGTAAAGGAGTGTGAAACAATGTTGGACCGTCTTTTCCCTGAGAATGATCCTCCTCCTGTTTCTGGTGAGACAACTCCCCAAGCTGAAGGTTACGATCCTTCAACTTCAACCACTACCAAGAGTGATGGTGGTTTGCTGATTCCCAAGGAATTAGCTGAGATCGAGTACATGGAGAGCCTATATATGAAGAGTACAGTATCAGCTTTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACTGTTAGCATGTTTTCATTGCCACCGTTGAAGATAAGTGGTTCAGAAGAAACATGGAAGAAAATTCCGGTTCTTGAACAAGCAGCCAAGTAA 858 0.4545 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAAADDRPGKRHKSDSAPTAADMSKEETDFRNLLESELDKFNTFFVEKEEEYIIRLKELQDRVVKVKDYSEEMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDRLFPENDPPPVSGETTPQAEGYDPSTSTTTKSDGGLLIPKELAEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKISGSEETWKKIPVLEQAAK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2253 285 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 285 - -
Vra7g2253 285 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 285 IPR031142 GO:0016036
Vra7g2253 285 MobiDBLite consensus disorder prediction 35 64 - -
Vra7g2253 285 Pfam SPX domain 109 161 IPR004331 -
Vra7g2253 285 Pfam SPX domain 1 35 IPR004331 -
Vra7g2253 285 MobiDBLite consensus disorder prediction 202 217 - -
Vra7g2253 285 MobiDBLite consensus disorder prediction 186 217 - -
Vra7g2253 285 CDD SPX_AtSPX1_like 2 148 - -
Vra7g2253 285 ProSiteProfiles SPX domain profile. 1 159 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2253 Vra-Chr7 42469324 42471988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2253 - - gmx:100787780 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2253 7 42469324 42471988 Vra7g2253 7 42469324 42471988 ECH
Vra7g2253 7 42469324 42471988 Vra3g1169 3 12370884 12373959 PCT