Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2247 ATGGAGACCAACAAACAACAGAGGAAGAAATGGTTCCTGCCACTTGTATCATCTCTACTTTTGTTAACCTTACTCATACTCTTTTCCATCTTCGTCTCCACCGATTCTTCCTCTTTGCTCTCCCTATACCGTACACGTGGCAGAGTGGAAGAGCCTCGTTTCGTCGAGTCAAAGCTCAGGGTGTCTTCCACGTCATCCAGCGAATCCGTTCCCAGGATCGCCTACCTGATCTCGGGGTCAGTGGGTGATGGCGAGACTCTGAAAAGGACCCTCAAGGCCCTTTATCATCCCAGGAATCAGTACGCTGTGCACTTGGACCTCGAGGCTTCTACGCAGGAAAGATTGGAGCTTGCCAACTTCGTCAAGAACGAGCCTCTCTTTGCCAAATTGGGCAATGTTAAGATGGTTGTTAAGGCTAACTTGGTCACCTACAGGGGACCTACTATGGTCACTAATACCCTTCACGCTGCGGCCATTTTGTTCAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTAAGCGCTTCTGATTACCCCTTGGTAACCCAAGATGATCTGTTGCATACGCTGTCATCAACTCCGAGACACCTTAACTTTATTGAGCACACCAGTGATATTGGCTGGAAAGAAGATCAGAGAGCCAAGCCTGTTATAATTGATCCAGCACTTTATAGTGTCAATAAATCTGATTTATTTTGGGTGACAGAGAAAAGAAATGTTCCCACAGCATATAAGCTGTTTACAGGTTCTGCTTGGATGATGCTCTCTCGCCAATTTGTCGAGTATTTGTTATGGGGATGGGATAACTTGCCTAGAATAGTCTTGATGTATTATGCCAACTTTCTATCCTCCCCCGAAGGTTATTTTCACACAGTCATCTGCAATGCTGATGAGTTCCGGAACACTACTGTAAATCATGACCTCCATTTCATATCATGGGATAACCCTCCAAAACAACATCCACACTTCCTAACAATCAATAACTACGAGGAAATGGTGGAGAGCAACGCTCCATTTGCTCGGAAATTTGGCTGCAACGAACAACTCTTGGATAAGATTGATACTGAACTCCTGGGACGAAACGAACATGGTTATGTCCCTGGCAAGTGGTTTGACCGGACAAATTCAAACACCACCAAACCATATTCTGCCATAAAAAATATCACCGAACTTAAGCCTGGCCCTGGAGCAGAAAGACTCAAACGTCTTATCAATGGTTTATTGTCAGCAGAAGATTTTCACACTAAGCAGTGTTCTTGA 1260 0.45 METNKQQRKKWFLPLVSSLLLLTLLILFSIFVSTDSSSLLSLYRTRGRVEEPRFVESKLRVSSTSSSESVPRIAYLISGSVGDGETLKRTLKALYHPRNQYAVHLDLEASTQERLELANFVKNEPLFAKLGNVKMVVKANLVTYRGPTMVTNTLHAAAILFKEGGLWDWFINLSASDYPLVTQDDLLHTLSSTPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLTINNYEEMVESNAPFARKFGCNEQLLDKIDTELLGRNEHGYVPGKWFDRTNSNTTKPYSAIKNITELKPGPGAERLKRLINGLLSAEDFHTKQCS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2247 419 Pfam Core-2/I-Branching enzyme 73 332 IPR003406 GO:0016020|GO:0016757
Vra7g2247 419 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 6 418 - -
Vra7g2247 419 PANTHER GLYCOSYLTRANSFERASE 6 418 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2247 Vra-Chr7 42440930 42444603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2247 1 418 Glycosyltransferase AT5G15050 61.538 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2247 K20891 - gmx:100789736 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2247 7 42440930 42444603 Vra7g2247 7 42440930 42444603 ECH
Vra1g1077 1 13074682 13080742 Vra7g2247 7 42440930 42444603 PCT