Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2230 ATGAGCTGGTCTGGAAGAGATTGGATGTGTGGTGTTTGCCAGCACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGAGGACCCGACCCTTCAACCTACAGATACAACAGGACTGAAGCTTTGGCAGGGGACTGGTTCTGCAACTGTGGAGGTCACAACTATGCCAGTCGATCAAACTGCTACAGATGTGGTGCAATGAAAGATGATTATTCTTCAGGATATGCCAACAACTCTGGAGGGTATGGATCTGACACTTTCCCTCCAGGATGGAAGACTGGAGACTGGCTTTGCCCAAGACATGGATGTGGAGTGCACAACTATGCCAGCAGGACAGAATGCTATAAATGCAAAATGCCAAGGGATTTTGGTGAGAACAGTGGTGCAGATTGA 411 0.4769 MSWSGRDWMCGVCQHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGGHNYASRSNCYRCGAMKDDYSSGYANNSGGYGSDTFPPGWKTGDWLCPRHGCGVHNYASRTECYKCKMPRDFGENSGAD* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2230 136 SUPERFAMILY Ran binding protein zinc finger-like 46 76 IPR036443 -
Vra7g2230 136 SMART zf_4 100 126 IPR001876 -
Vra7g2230 136 SMART zf_4 50 73 IPR001876 -
Vra7g2230 136 SMART zf_4 6 30 IPR001876 -
Vra7g2230 136 Gene3D - 1 35 - -
Vra7g2230 136 Gene3D - 42 76 - -
Vra7g2230 136 Gene3D - 93 129 - -
Vra7g2230 136 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 132 - -
Vra7g2230 136 ProSitePatterns Zinc finger RanBP2-type signature. 102 123 IPR001876 -
Vra7g2230 136 ProSiteProfiles Zinc finger RanBP2 type profile. 3 33 IPR001876 -
Vra7g2230 136 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Vra7g2230 136 Pfam Zn-finger in Ran binding protein and others 98 126 IPR001876 -
Vra7g2230 136 SUPERFAMILY Ran binding protein zinc finger-like 92 129 IPR036443 -
Vra7g2230 136 ProSiteProfiles Zinc finger RanBP2 type profile. 98 129 IPR001876 -
Vra7g2230 136 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Vra7g2230 136 PANTHER ZINC FINGER PROTEIN 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2230 Vra-Chr7 42315879 42318252 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2230 - - gmx:100780120 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1188 3 12604278 12605149 Vra7g2230 7 42315879 42318252 PCT