Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2003 ATGAGTCTCATGAACTCTCCCACACGGGTGACGGTTGGTGATGCTAATTACATGGACTGGACTGGCGTTAACAACCACTACAGAACTGCTTACAAAGTGGACGACCAAAAATCCGTTATGGATGTGGCACTCATTTCAAACATGGATCCTGTAAATATTGGGCTGGCTTGTTCAGACAAGCCAGGTCCCGTCACTTCCCTGAAGCCCAGAAAGAAAACAATGACATCAGTGTATTTGAAGTTCTTTGAGACAGCTGTTGATGGCAAGACTCGCAGATGCAAGTTCTGTGGACAGAGCTATTCCATTGCAACCGCTACAGGCAATCTGGGAAGGCATCTTGCTAATCGCCATCCAGGTTATGACAAGTCAGGTGACGCTGTCAACAATTCAGCTGCAAGGCCTATCACTGTGGTGAAGAAGTCACAGCCTCAAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCGTTAGGTGGCTTGTTCTAGCTGCTCTCCCACCTTCAATTCTAGAAGAGAAGTGGCTTGTGAATTCCTACAAATTTTTGAATCCTTCCATACAACTCTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTCTTCAGAAGCATGAGGGAAGATGTAAGAGCATTGTTGGAACAGGTTTCTTCAAAGTTGTCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATTTACTATATGAGTGTGACATGTCAATGGATCGACGAAAACTGGTGCTTCCAGAAATTGCTTCTTGATATCTGTCGAATTCCTTATCCATGTGGGAGTACAGAGATATATCGTTCCCTCGTAAAAGTTCTCAAATTTTACAATATTGAAACCAGAATTCTGTCCTGTACCCACGACAATAGTACAAGTGCTATGCATGCTTGCCATACTTTGAAAGAGGACTTAGATGGCCAGAAAATAGGGCCTTTCTGTTATATTCCCTGTGCTGCTCGAACTTTGAATGTGATAATAGATGATGGATTGAGATCTGCAAAACAAGTAATTTCTAAGATACGGGAGTTTGTAATAGAGTTAAATGCCTCACCAGTGATCTCTGAGGATTTTATTCAAATATCCACTGCTTATCAAGAAGGCATCTGGAAATTTCCTCTTGATATTTCAGCGAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGCAAGGCAGGTAAATCAGTGGATGCTGTTATTCGAAAATACGAAGAAATGCTAGGCAGCAGGATGCTGCTGGGATCTTCTGACAAAAGTGTGGTTAGCATCATGCATCAATATCTTGAACCATTCTACAAAACCACAAACAACATCTGCACAAGTAAGGTGCCAACGGTTGGGCTTGTGCTTTTCTTCATGGATCACATATCAGAGACCATTAATTCCTGCAGAGAATCGCGCCACAGCCCAGACTGGCTAAAAAATGCTGCAGAGGAAATGGCTAAAAAGGCCAGAAACTACATCCACCAGGTTTGCAACATATTCACTTATATGACTGCAATTCTAGATCCTCGAATAAAGGGAGAGCTGATCCCTGATAGTTTAAACTCGGAAACTTTTTTGGACGATGCGAGATCCCATTTTATAAGAAATTATTCTACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAAATTGAAGAAGGAGGAAGCGTTTCCTTTGCAGAGGAAATTGCACGCAAGAAGCGAAGGACAACCATGAGTTCTGCTACTGATGAGCTTACACAGTACCTTTCAGAGGCTCCAGCTCCAATACCAACAGATGTTCTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTTATGGCTAGAGATTTCCTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAGCAACGAATCTGTATGCCACATGACAGCACACAGGCAATTCTTTGTATCAAGTCATGGATTCAGGTTGGCGTCAAGTTTAAGTTTAAATCCACTGAAATAGATTATGAGCGGTTGATGGAATTGGCAGCAGCAGCTGCTGCAACAGATAATAGTCCTGCAAGTTCTGATAAGAAGCCAAAGTAA 2109 0.4272 MSLMNSPTRVTVGDANYMDWTGVNNHYRTAYKVDDQKSVMDVALISNMDPVNIGLACSDKPGPVTSLKPRKKTMTSVYLKFFETAVDGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVNNSAARPITVVKKSQPQGKANQVDYDHLNWLLVRWLVLAALPPSILEEKWLVNSYKFLNPSIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKLSITLDFWTSFEQIYYMSVTCQWIDENWCFQKLLLDICRIPYPCGSTEIYRSLVKVLKFYNIETRILSCTHDNSTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNVIIDDGLRSAKQVISKIREFVIELNASPVISEDFIQISTAYQEGIWKFPLDISARWSGNYQMLDLVRKAGKSVDAVIRKYEEMLGSRMLLGSSDKSVVSIMHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETINSCRESRHSPDWLKNAAEEMAKKARNYIHQVCNIFTYMTAILDPRIKGELIPDSLNSETFLDDARSHFIRNYSTSHFSSMSSGYNAQEIEEGGSVSFAEEIARKKRRTTMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRICMPHDSTQAILCIKSWIQVGVKFKFKSTEIDYERLMELAAAAAATDNSPASSDKKPK* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2003 702 Pfam Domain of unknown function (DUF4413) 445 525 IPR025525 GO:0003677
Vra7g2003 702 PANTHER BED FINGER-RELATED 56 672 IPR045259 -
Vra7g2003 702 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 56 672 - -
Vra7g2003 702 Pfam hAT family C-terminal dimerisation region 582 662 IPR008906 GO:0046983
Vra7g2003 702 SUPERFAMILY Ribonuclease H-like 209 664 IPR012337 -
Vra7g2003 702 SMART bed5 73 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2003 - - ahf:112708868 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2003 7 39512211 39516525 Vra7g2003 7 39512211 39516525 ECH
Vra7g2003 7 39512211 39516525 Vra2g1625 2 24330983 24335104 PCT