Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1625 ATGATGGTTGGTACCCTCGAAGAAGACCAAGTGGTGATTCCTCATATTAAAGCTGATCCAGTTTTTGGTGCTGATTCTCAGCCCAGCAATGATCTAGCAGAGTCTGAAACACTGCTAGATAGTAGTGTGGAAAAGTCTGATTGTGTGCCGAACAAAGATCTGTCCAATTTGGAAACACAGCCTCACAAGGAACTTACTGCTTCTGAAACACTGGCTACTAATGATGAAGCAGTGGCATTGCCCAATCAACATTTGGGCAACTCTGAAGAACCTGTGATTGACCATTCTAACAATGGTGAGGCCTCACATAACAGTCAGACAGTTAACTCTGGGGTGCCACCAACCAACGCCGACTCTGAAGTTTTATTTGACTGTCAGTTGGTTAATTCTGAAGCACGAGCAGCGCTTGATAAGAAGGCTTCACAATGCAGTAACCAGCAGGTGCATACTGAGGCATTGCTAAACCATAATGTGGGTAATTCTGAAACATATACTAGTAATAGTAATGGTGAGCTTGTATATGAAATACAGCACAGTGATGAGGTGGTTATGTCTGAAACAGTGCTAGGCCAGGAGGGGATCATGTCCGAGACTCGGCAAAGCAATGACGTGATCATGTTTGAGACACAGTTCAACAATGATGCCAACATGCCTAAAATCCAGACAGGCAATGATGTGGTCATGTTGGAAGCTCTGCCTGAAAATGAGTTGGCTTCTGCAGCAGATCCAAACAATCAGCCTTCCCATTCTGAAACTAGTCATGATAATCAGTTCACGAATCTCCATATGATTCCTGAAGATCAGCTGCCTCAACCTGAATCGCTGCCCCACTCAGAACTGCTACCCAATTCTGAGCCACTGGTAGATGATCATCTCACAGACATCAAAGTATTATATCACAATCATCTGACCCATTATGAAACACTGCCTAACAATCATTCTAACCATTCTGAGGATTTATCCCACCATCAACTATCTAACAATGAAGTATTCTCCCATGATCAGCTGATCAATTCCCAAATGCTGTCTCATTATGAGCTGGAAAATAGTGAAGCAATGCACCACAATCAGTTAGTCAATTCTCAAGAAAACTATGACATAGCCATTTCTGATGCCATACCCAGCTACGAGATAATAAGTGCCGAGACACCACTGAACAGCGAGGTTTATATCTCAGAAACCCAACCTACTAAGCGGAGGAAAAAAAAGTCTGTAGTCTGGGAGCACTTCACAATAGAAACAGTAAGTCCTGGGTGTAGAAGGGCACGGTGCAAGCAATGTGCTCAAACTTTTGCGTATAGTACAGGTTCAAAAGTTGCTGGCACCAGCCATCTCAAACGCCACATTGCCAAGGGGACCTGCTCAGCTCTTTTACGCAACCATGACCCTAATCAATTGGCCCCATATACTGTACGAAATAGGGGAAGTGGGGCTGGAAATGCTAGCAGTACACCTAAAAAGCGATATAGATCGCCCAGTACCCCTTATGTCGCTTTTGATCAGGACAGATGCCGCCATGAAATTGCTAGAATGATTATTATGCATGATTACCCTCTTCACATGGTTGAGCATCCGGGATTTGTTGCATTTGTTCAAAATCTGCAGCCACAGTTCAACATGGTGACCTTTAACTCTATTCAAGGAGATTGTGTTGCAACTTTTCTTCTTGAAAAGAATCATCTTTTGAAGTATATTGTGGGGTTACCTGGACGTGTTTGTTTGACACTGGACATCTGGACATCAAGTCAATCATTAGGTTATGTATTTATCACAGGACATTTTGTGGATCATGATTGGAAGTTGCAAAGGCGAATTCTCAATGTTGTATTGGAACCATATCCTTATTCAGATTCGGCACTTACCCATGCTGTTGCTGTTTGCCTTTCTGAGTGGGATTTGGAGGGTAGGCTATTTTCTGTCACTTGTAATCAGGCTCTGAGTAATGTTGCCCTTGAAAATCTCAGACCATTACTCTCTGTGAAGAATCCACACATCCTCAATGGTCAGTTACTAGTTGGTAATTGCATTGCTCAGACTTTAAGTAGTGTTGCAAATGACTTGTTGGGTTCGGCTCAAGACTTGATCAGTAAAATCCGTGATAGTGTTAAGTATGTGAAGACCTCCGAGTCACACGAGGAAAAATTCTTGGAGCTGAAACAGCATCTTCAGGTTCCTAGCGAAAGGAGCCTTTTTATTGATGACCAAATTCATTGGAATACATCATATCAAATGCTTGTGGCAGCTTCTGAGCTAAAGGAAGTATTTTCTTGTTTGGACACTTCTGATCCCGACTACAAGGGAGCGCCATCAATGCAGGACTGGAAGCTGGTTGAAACCCTCTGTAGCTACCTGAAGCCCCTTTTTGATGCAGCAAACATTCTTACTGCAACAACTCATCCCACTGTTATCACCCTTTTTCAAGAAGTTTGGAAATTGCAATTAGACGCAGCTCGTGCAGTTACGAGTGAAGATCCCTTCATTAGCAGCCTTAATAAAATTATGCATGAAAAGATTGATATTTACTGGAGAGAGTGTAGTCTGGTTTTGGCGCTTGCAGTAGTTTTGGATCCCCGTTTTAAGATGAAGCTTGTTGAGTTCAGTTTCACAAAAATTTATGGCGATGATGCTCATTTATATATCAAGACTGTGGAAGATGGAATTCATGAGATGTTTCATGAGTATGTAGCCCTTCCATTGCCACTAACACCTGCTTATGCTGAAGTTGGAAGTTCGGGAAACCGTAGTAGGATGGAGGAATACCCAGGAGATGCTGTGTTGTCTGATAATGGTCTAACAGATTTCGATGCGTACATCATGGAAACTACTAGCCAACAGACGAAGTCTGAGCTAGATCAGTACCTTGAAGAATCATTGTTACCGCGTGTTCCAGACTTTGATGTATTAGGTTGGTGGAAGCTAAACAAACTCAAGTACCCTACTCTTTCCAAGATGGCCCGGGATATATTATCTGTTCCGGTTTGTACTGTTGCTCCCGATTCTGTGTTTTATTCAAAAAGCAAAGAGATGGATCATTATCGGAGTTCCTTGAGGCCAGAGACAGTAGAGGCAATTGTATGTTCTAAGGACTGGATGCAGTATGGAACAGCTGAAGCTTCTAATGCGCTTGTGAAAATGGTATTCTAG 3144 0.4265 MMVGTLEEDQVVIPHIKADPVFGADSQPSNDLAESETLLDSSVEKSDCVPNKDLSNLETQPHKELTASETLATNDEAVALPNQHLGNSEEPVIDHSNNGEASHNSQTVNSGVPPTNADSEVLFDCQLVNSEARAALDKKASQCSNQQVHTEALLNHNVGNSETYTSNSNGELVYEIQHSDEVVMSETVLGQEGIMSETRQSNDVIMFETQFNNDANMPKIQTGNDVVMLEALPENELASAADPNNQPSHSETSHDNQFTNLHMIPEDQLPQPESLPHSELLPNSEPLVDDHLTDIKVLYHNHLTHYETLPNNHSNHSEDLSHHQLSNNEVFSHDQLINSQMLSHYELENSEAMHHNQLVNSQENYDIAISDAIPSYEIISAETPLNSEVYISETQPTKRRKKKSVVWEHFTIETVSPGCRRARCKQCAQTFAYSTGSKVAGTSHLKRHIAKGTCSALLRNHDPNQLAPYTVRNRGSGAGNASSTPKKRYRSPSTPYVAFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNSIQGDCVATFLLEKNHLLKYIVGLPGRVCLTLDIWTSSQSLGYVFITGHFVDHDWKLQRRILNVVLEPYPYSDSALTHAVAVCLSEWDLEGRLFSVTCNQALSNVALENLRPLLSVKNPHILNGQLLVGNCIAQTLSSVANDLLGSAQDLISKIRDSVKYVKTSESHEEKFLELKQHLQVPSERSLFIDDQIHWNTSYQMLVAASELKEVFSCLDTSDPDYKGAPSMQDWKLVETLCSYLKPLFDAANILTATTHPTVITLFQEVWKLQLDAARAVTSEDPFISSLNKIMHEKIDIYWRECSLVLALAVVLDPRFKMKLVEFSFTKIYGDDAHLYIKTVEDGIHEMFHEYVALPLPLTPAYAEVGSSGNRSRMEEYPGDAVLSDNGLTDFDAYIMETTSQQTKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTLSKMARDILSVPVCTVAPDSVFYSKSKEMDHYRSSLRPETVEAIVCSKDWMQYGTAEASNALVKMVF* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1625 1047 MobiDBLite consensus disorder prediction 39 62 - -
Vra2g1625 1047 MobiDBLite consensus disorder prediction 468 490 - -
Vra2g1625 1047 Pfam Domain of unknown function (DUF4413) 796 894 IPR025525 GO:0003677
Vra2g1625 1047 MobiDBLite consensus disorder prediction 89 111 - -
Vra2g1625 1047 MobiDBLite consensus disorder prediction 468 493 - -
Vra2g1625 1047 SMART bed5 401 457 - -
Vra2g1625 1047 MobiDBLite consensus disorder prediction 86 111 - -
Vra2g1625 1047 SUPERFAMILY Ribonuclease H-like 566 1032 IPR012337 -
Vra2g1625 1047 SUPERFAMILY beta-beta-alpha zinc fingers 404 452 IPR036236 -
Vra2g1625 1047 PANTHER - 362 1039 - -
Vra2g1625 1047 Pfam hAT family C-terminal dimerisation region 949 1031 IPR008906 GO:0046983
Vra2g1625 1047 PANTHER BED FINGER-RELATED 362 1039 IPR045259 -
Vra2g1625 1047 ProSiteProfiles Zinc finger BED-type profile. 401 461 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1625 Vra-Chr2 24330983 24335104 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1625 - - gmx:106796566 1585.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2003 7 39512211 39516525 Vra2g1625 2 24330983 24335104 PCT