Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1937 ATGGAGGGCAGGAGTAAGAAGAAGAGTAAAGAAAGCAGTGCGAGCGGTCAACGGCGTGTGGGTTTACTATACGATAGGAGGATGTGCAAACACTACGCGCCGAACGAGCCCAAGCACGTGGAGAATCCTAATCGCATTAGGTCAATTTGGAACCGACTCGAAGCCGCCGGCGTTCCTCAACGATGCGTGCTTTTAGAGGCCAAGAAAGCTGAGGACAGACATGTGCGGTTAGTTCATTCCAGACATCATGTGAATCTGATTAAGAACATTAGCGCCAGGGGGTTCAAATCGCGGAGGTCTCAGATTGCCTCCGAATTGAATTCCGTATATTTTAATGAAGGTTCTTCTGAAGCTGCGTTCCTTGCTGCTGGCTCTGCTGTAGAGGTTGTTGAAAAGGTGGCAAGTGGGGAATTGGATTCAGCTGTTGCCATTGTGAGGCCCCCAGGTCATCATGCAGAACATAATGAAGCTATGGGATTTTGTCTCTTCAACAATGTGGCAGTTGCTGCTAGATATCTCTTAGACGAAAGACCTGATTTAGGTGTGAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTCTCTGTTCACAGGCATGACTTTGGGGCTTTTTATCCTGCTGAGATCCACGGGTCTTATGATCAGGTGGGAGAAGGAGAAGGTGCTGGATATAATATAAATGTCCCCTGGGAGCAGGGGAAATGTGGTGATCCAGATTACATTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCCAAAGAATTTAATCCAGACATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTCCGTGACCCTCTAGGAGGATGTCGTCTCACAGCAGTTGGTTATTCTATTCTGTTGGAGAAGTTGATGAATTTTGCTAAAGGTAGGATTGTACTGATTTTAGAAGGGGGGTATCATCTTGATTCCATTGCAAAATCAATGCATGCTTGCTTGGAAGTTTTGCTAACTGGCAAGTCTGTTACCGAATCCTCAGAGGCCTATCCATTTCAGTCTACATGGAATGTGATTCAAGCGGTTCGCGAGATGTTAAGTCCATTTTGGCCTACACTTGCACCTAAACTACCACAAGAGTTAGTCTCAAAAATAGGCCCCTCTCCGCATACTCTGATTTCAAGCTCGGACTCTGAAGATGAGGATGATACGGGTGCACCAAGTTCAGGAAATCTTGGAGAACTTATTGAGGATGTCTTAAAACCACTTTCCAAACTGAAAGTGGATGCTGATGAGGAGATTCACGTTTCTAGTACTTGGCGATCTGCATTGTCAAATGTTTATATATGGTATGCCTCCTATGGATCAAATATGTGGAAAGCAAGATTTAATTGCTACCTAGAAGGTGGACAGGTGGATGGTATGGTGAAGCAGTGTTCTGGTTCAGTGAACAGAACTCTGCCAAAGGAGATCACGTGGAAGACTTTCCCTTGTGATATATTCTTTGGTCGTGATTCATCGCATTCATGGGGACTGGGAGGCGTTGCATTTCTTAATCCTGAAAAAAAGTTTGAAGGCAAGACCTACATGTGCTTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAGAACATTTTAAGCCTTGATGCGAGCTCTCCTTTATTTGATATAACTACCTTGAATGCGATCTCTGACAAGGAGTTCAACTCCCTGGAGGTTGTCAAGGGTGCTTGGTATGGTAATGTTGTCTACTTAGGAAAGGAGCAAGATATTCCTGTGATTACCATGACGTCTTCGCTTCTTGATATGGAACGTTTCAAATCTGGGAAGCTACCATTACGTGCCCCTAATAAAGCGTATGCCAACTCCTTAATTAAAGGGTTAGTAGAGGGAGAACAACTTTCGGAGGCGGAGGCCATTGCTTATATAGAAGGTGCTGCTAAATCCTTGTGA 1974 0.4387 MEGRSKKKSKESSASGQRRVGLLYDRRMCKHYAPNEPKHVENPNRIRSIWNRLEAAGVPQRCVLLEAKKAEDRHVRLVHSRHHVNLIKNISARGFKSRRSQIASELNSVYFNEGSSEAAFLAAGSAVEVVEKVASGELDSAVAIVRPPGHHAEHNEAMGFCLFNNVAVAARYLLDERPDLGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHDFGAFYPAEIHGSYDQVGEGEGAGYNINVPWEQGKCGDPDYIAVWDHILLPVAKEFNPDIIIVSAGFDAAVRDPLGGCRLTAVGYSILLEKLMNFAKGRIVLILEGGYHLDSIAKSMHACLEVLLTGKSVTESSEAYPFQSTWNVIQAVREMLSPFWPTLAPKLPQELVSKIGPSPHTLISSSDSEDEDDTGAPSSGNLGELIEDVLKPLSKLKVDADEEIHVSSTWRSALSNVYIWYASYGSNMWKARFNCYLEGGQVDGMVKQCSGSVNRTLPKEITWKTFPCDIFFGRDSSHSWGLGGVAFLNPEKKFEGKTYMCLYKISLEQFNDILFQENILSLDASSPLFDITTLNAISDKEFNSLEVVKGAWYGNVVYLGKEQDIPVITMTSSLLDMERFKSGKLPLRAPNKAYANSLIKGLVEGEQLSEAEAIAYIEGAAKSL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1937 657 Gene3D - 444 655 - -
Vra7g1937 657 Gene3D Histone deacetylase domain 13 389 IPR037138 -
Vra7g1937 657 PANTHER BNAA09G05590D PROTEIN 8 612 - -
Vra7g1937 657 MobiDBLite consensus disorder prediction 395 415 - -
Vra7g1937 657 PRINTS Histone deacetylase superfamily signature 147 170 IPR000286 -
Vra7g1937 657 PRINTS Histone deacetylase superfamily signature 274 284 IPR000286 -
Vra7g1937 657 SUPERFAMILY Arginase/deacetylase 18 374 IPR023696 -
Vra7g1937 657 Pfam Histone deacetylase domain 39 339 IPR023801 -
Vra7g1937 657 PANTHER HISTONE DEACETYLASE 8 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1937 Vra-Chr7 38880060 38885498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1937 K11406 - gmx:100788831 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1937 7 38880060 38885498 Vra7g1937 7 38880060 38885498 ECH
Vra7g1937 7 38880060 38885498 Vra3g1066 3 10866948 10868969 PCT