Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1066 ATGGCAGAAGGCGCTGCACCCGAAGTCGCCGATCCCATCGCCGTCGCCGCCGTAGACATGGACGTCGAGAAACCCGGCGAAAACGGTGGCGAGACTAACCAGAAACGTTCCAGGGAGGACGAGGAGCCCCTGGCGGACGAGGGGCCCCTGGCGGACGACGTTTCGAAGAAGCAGAAGGTGGACGAGGAAAAGTCCGTAGAGGAGCAACGACTGGAGAATAACAATGATCAGGAAGGAAATAGAAAGGAAACAGAGGAAGATAAAATGGCCGAAGCAGAAGCAGAAGGAAAAGAAGAGGATGCCGCAAGTGTTTCCGTGAAGTTGGGATACAAGAGCTTCGGTTCTTCCTCGGAGATGTACCATTACTTCTTCAACATACTTCATCACTGGCCTCAATATATCAATATTAACAAGTATGAACATGTAATGTTGTTGGAGTTGCTTAAGAACGGCCATGCAGAGCCTGAAAAAAAGATGGGTGGAGGGGTTCGCGCTTTCCAAGTTCGCAAGCATCCTACCTACCAAAGTAGGTGCTTTTTCCTCATCAGGGAAGATGACTCTGTTGATGATTTTAGCTTCAGGAAGTGTGTGGATCACATTCTTCCCTTACCAGATGGGATGCATTTGAAATCTGACGCGAATAAGGCATTTGGTGGTAATGGTGGTGGGGGAGGAAAGGGTGGCAGAGGTTGGCGTGGTGGAAGAGGTGGGCGTGGTGGAAGAGGCGGACGGGGTGGAAGAGGCGGGCGTGGTGGAAAAGGTGGTCATGGGTAA 774 0.5155 MAEGAAPEVADPIAVAAVDMDVEKPGENGGETNQKRSREDEEPLADEGPLADDVSKKQKVDEEKSVEEQRLENNNDQEGNRKETEEDKMAEAEAEGKEEDAASVSVKLGYKSFGSSSEMYHYFFNILHHWPQYININKYEHVMLLELLKNGHAEPEKKMGGGVRAFQVRKHPTYQSRCFFLIREDDSVDDFSFRKCVDHILPLPDGMHLKSDANKAFGGNGGGGGKGGRGWRGGRGGRGGRGGRGGRGGRGGKGGHG* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1066 257 MobiDBLite consensus disorder prediction 218 257 - -
Vra3g1066 257 PANTHER PROTEIN EMBRYO DEFECTIVE 514 16 236 - -
Vra3g1066 257 Coils Coil 57 102 - -
Vra3g1066 257 MobiDBLite consensus disorder prediction 1 101 - -
Vra3g1066 257 Gene3D - 101 200 - -
Vra3g1066 257 MobiDBLite consensus disorder prediction 24 101 - -
Vra3g1066 257 PANTHER - 16 236 IPR044673 -
Vra3g1066 257 Pfam Protein of unknown function (DUF3223) 125 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1066 Vra-Chr3 10866948 10868969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1066 - - vra:106757256 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1066 3 10866948 10868969 Vra3g1066 3 10866948 10868969 ECH
Vra7g1937 7 38880060 38885498 Vra3g1066 3 10866948 10868969 PCT