Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1936 ATGGCTGCTCTAGCTCTTGCACTGCTTCTTTTAGCTTTCACTGGCACTTCAAGTGCAACTTGGTGCGTTTGTAAGGATGGAGGCGACGCGATCCTGCAGAAAACATTGGACTATGCTTGTGGAGCTGGCGCTGACTGTAACCCTCTCCATCAAAACGGGCCTTGCTTCCAGCCCAACACCGTCAGGGCTCACTGTAACTACGCCGTGAATAGCTACTTCCAAAAGAAGGGTCAGGCTCAAGGGTCCTGTGAGTTTGCAGGAACAGCCACTGTTACTGCTACTGACCCCAGCACTGGCGGTTGTGTCTACCCTTCAAGTGTCAGTGCTGCAGGAACTGGTACAACTCCTGTGACAACTACACCAACCATGGGCACCACTCCCACCACTGGAACCCCATCAACCGGTACCGGCACCGGCACTGGCACTGGAACCACCACCGGTACTACTCCATACAGCACAACACCGGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGAGAGTGACGGTGGCCTTAGACTAGTGCACTCTAGCTTCTTCTTGATCTCTCTCTTGTCCTCCTTGATGATCTTCTGCTGGGGCTGA 609 0.5353 MAALALALLLLAFTGTSSATWCVCKDGGDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTATDPSTGGCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTGTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESDGGLRLVHSSFFLISLLSSLMIFCWG* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1936 202 PANTHER BETA-1,3 GLUCANASE 1 193 IPR044788 -
Vra7g1936 202 Pfam X8 domain 20 90 IPR012946 -
Vra7g1936 202 SMART X8_cls 20 103 IPR012946 -
Vra7g1936 202 MobiDBLite consensus disorder prediction 111 156 - -
Vra7g1936 202 Gene3D - 15 110 - -
Vra7g1936 202 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 193 - -
Vra7g1936 202 MobiDBLite consensus disorder prediction 111 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1936 Vra-Chr7 38874079 38877502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1936 16 133 Glycoside Hydrolase AT1G66250 39.167 2.64e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1936 - - gmx:100500078 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1121 3 11663750 11668326 Vra7g1936 7 38874079 38877502 ECH
Vra7g1936 7 38874079 38877502 Vra7g1936 7 38874079 38877502 ECH