Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1885 ATGGTTGGCGACAAGACGAAGAAGTTGAAAATCGCCGAGAATTTGGAAGATACCATCGACGAAAAACTCATCCTCTCCATTGAGAAGTTGCAAGAGGTCCAAGACGAACTCGACAAGATCAATGAGGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTTTAACGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCATCGTCAAATCTATTCCTGATTTCTGGTTTACTGCTTTTATGAGTCACCCTGCTCTTTGTGAACTTCTGAATTTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTCGAGGTTGAAGATAATAAAGATGTCAAATCTGGGTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACGAAGACTTTTACCTTCTTTGAAGAAGGATCAACAAAGATAACTGCTACCCCCATTAAATGGAAAGAGGGCAAGGGATTACCCAATGGAGTCAATCTTGACAAGAATGGGAAGCGGGGTCGTATTGATATCAGTTTCTTTACTTGGTTTAGTGACTCTGAACAGAAAGACGATGCGGATGAAATTCATGATGAGGTTGCAGAATTGATCAAAGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGAGTTTGACGAAGAGGATTTTGATGATGAAGGTGATGATGAGGAAAAGGATGAGGATGACCAAGAAGATGATGATGACGAGGAAAGCAATGATATTTGA 756 0.3929 MVGDKTKKLKIAENLEDTIDEKLILSIEKLQEVQDELDKINEEASDKVLEVEQKFNEIRKPVYDKRNEIIVKSIPDFWFTAFMSHPALCELLNLEDQKIFKYLGSLEVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFFEEGSTKITATPIKWKEGKGLPNGVNLDKNGKRGRIDISFFTWFSDSEQKDDADEIHDEVAELIKDDLWPNPLTYFNNEFDEEDFDDEGDDEEKDEDDQEDDDDEESNDI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1885 251 Gene3D Nucleosome assembly protein 75 221 - -
Vra7g1885 251 Coils Coil 23 54 - -
Vra7g1885 251 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 247 - -
Vra7g1885 251 Gene3D - 3 74 - -
Vra7g1885 251 SUPERFAMILY NAP-like 13 218 IPR037231 -
Vra7g1885 251 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 247 IPR002164 GO:0005634|GO:0006334
Vra7g1885 251 MobiDBLite consensus disorder prediction 220 251 - -
Vra7g1885 251 Pfam Nucleosome assembly protein (NAP) 72 219 IPR002164 GO:0005634|GO:0006334
Vra7g1885 251 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1885 Vra-Chr7 38375235 38379034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1885 K11290 - gmx:100810307 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1080 3 11141729 11145334 Vra7g1885 7 38375235 38379034 ECH
Vra7g1885 7 38375235 38379034 Vra7g1885 7 38375235 38379034 ECH
Vra3g1080 3 11141729 11145334 Vra7g1885 7 38375235 38379034 PCT