Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1744 ATGGCCGTAGCTGATCCCAAGCCTCACTCCGAACCCAAGGTCTGGAACTTCTTCAAGCTTCCCTTTCGCCATTCCACCTCTGCAACCTCTACGACTTCCTCTTCTGCTAACCTTCACCTCCATCACCACCATCACCACCACAACCCTAACAATCTTCCCCTCGAGGGCTCCACCTCCCACACCTCCAATTCCGTTTCCTCCGTCGCCAGATCGCTTCTCCCAACACGACGTCGTCTCAAGCTCGATCCCTCCAATAAGCTTTACTTCCCCTATGAGCCGGGCAAACAGGTTAGGAGTGCCATCAGGATTAAAAACACCAGTAAATCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAAAGCTGTTTCATGCGTCCTCCTGGAGCCATCCTTGCCCCTGGTGAGAGTATCATAGCTACAGTGTTTAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCTGAGAAAACTGGACTCAAATTTAAAATCATGAGCTTGAAGGTGAAAGGATCAATTGATTACGTCCCTGAACTGTTTGATGAGCAGAAGGACCAAGTAGCAGTGGAGCAGATTCTGCGAGTTGTTTTTCTAGATCCAGAGCGTCCTTGTCCTGCTTTGGAAAAACTGAACCGACAACTAGCTGATGCGGATGCTGCCCTTGAGGCACGTAAGAAACCTGTGGAAGATGCAGGTCCAAAAATTATCGGGGAAGGGCTCGTCATAGACGAATGGAAAGAGAGGAGAGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGATTGTAGATTCTGTATAG 798 0.4812 MAVADPKPHSEPKVWNFFKLPFRHSTSATSTTSSSANLHLHHHHHHHNPNNLPLEGSTSHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKPEKTGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPCPALEKLNRQLADADAALEARKKPVEDAGPKIIGEGLVIDEWKERRERYLAKQQGEVIVDSV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1744 265 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 198 IPR000535 -
Vra7g1744 265 MobiDBLite consensus disorder prediction 28 71 - -
Vra7g1744 265 MobiDBLite consensus disorder prediction 51 71 - -
Vra7g1744 265 SUPERFAMILY PapD-like 67 206 IPR008962 -
Vra7g1744 265 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 38 257 - -
Vra7g1744 265 Gene3D Immunoglobulins 74 202 IPR013783 -
Vra7g1744 265 Pfam MSP (Major sperm protein) domain 79 188 IPR000535 -
Vra7g1744 265 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 38 257 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1744 Vra-Chr7 36250181 36254755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1744 - - gmx:100808835 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1744 7 36250181 36254755 Vra7g1744 7 36250181 36254755 ECH
Vra7g1744 7 36250181 36254755 Vra10g1383 10 19087985 19090981 PCT