Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1383 ATGGCGATAGGTGAAGAAAGACAAGAATCACAATCACAATCAGAAGGAAAAGTTTGGAATTTGTTGAAGCTTCCCTTTCGCCATTCAACTGCTTCAACCTCCAATTCCGTTTCTTCCCTTGCCAGATCTCTCCTCCCCACACGACGTCGTCTCAAGCTCGATCCTTCCAACAAGCTCTACTTCCCTTATGAACCGGGCAAGCAGGCTAAGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAATGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGCTGTTTCATGCGCCCTCCAGGGGGCATACTAACACCTGGCGAGAGTATAGTAGCGATTGTGTTCAAGTTTGTAGAGCCTCCACAGAATAATGAAAAGCCAGAAAAAACTGGACTCAAATTTAAAATCATGAGCATGAAGGTCAAAGGATCAATTGATTATGTACCTGAAATGTTTGGTGAGCTGAAGGATCAAGTAACAGTCGAGCAGATTTTGCAGGTTGTTTTTCTGGATCCAGAGCGTAATAGCCCTGCTTTGGAAAAACTAAGGCTTCAGCTAGCTGAGGCTAATGCTGCAGCTGAGGCACGTAAGAGAGCCCCAGAAGATGCAGGTCCTAGGATTCTCGGAGAAGGGCTTGTTATAGACGAATGGAAAGAGAGGAGGGAAAGATACCTGGCAAAGCAGCAGAGTGAAATGGTAATGGACTCTATATAG 714 0.4496 MAIGEERQESQSQSEGKVWNLLKLPFRHSTASTSNSVSSLARSLLPTRRRLKLDPSNKLYFPYEPGKQAKSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGILTPGESIVAIVFKFVEPPQNNEKPEKTGLKFKIMSMKVKGSIDYVPEMFGELKDQVTVEQILQVVFLDPERNSPALEKLRLQLAEANAAAEARKRAPEDAGPRILGEGLVIDEWKERRERYLAKQQSEMVMDSI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1383 237 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 27 231 - -
Vra10g1383 237 Pfam MSP (Major sperm protein) domain 51 159 IPR000535 -
Vra10g1383 237 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 27 231 IPR016763 GO:0005789
Vra10g1383 237 Gene3D Immunoglobulins 46 174 IPR013783 -
Vra10g1383 237 ProSiteProfiles Major sperm protein (MSP) domain profile. 50 170 IPR000535 -
Vra10g1383 237 Coils Coil 179 199 - -
Vra10g1383 237 SUPERFAMILY PapD-like 40 178 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1383 Vra-Chr10 19087985 19090981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1383 - - gmx:100786563 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1744 7 36250181 36254755 Vra10g1383 10 19087985 19090981 PCT