Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1660 ATGGCAGGAGGTGGGGGAGCTCCGGCGCCTAAGATTGATGAGCCACAACCACATCCACCGAAAGATCAGCTACCAAATGTTTCCTACTGCATTACCAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGGTTTCAACATTATATTGTGATGCTCGNTACAACTGTGCTAATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATTCAAACTCTACTCTTTGTAGCTGGAATTAACACATTGCTGCAGACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTATGTTGCAACAACCATCTCTATTATTCTTGCTAGCCGTTTCAGTGATGAGCCAGATCCTGCAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCATCAACTCTTCAAATAGTACTAGGTTTTAGTGGGCTTTGGCGTAATGTTGCAAGGTTCTTGAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTTTACGAGCTCGGCTTTCCTAGTGTTGCTAAATGTATAGAGATTGGACTGCCGCAGCTCATATTGCTAGTATTTGTTTCACAGTTTGTACCCCATGTTCTACATGCAGGAAAACATGTCTTCGAACGGTTCACTGTTTTATTTACAGTTGCAATTGTGTGGCTATATGCCTATCTGCTCACTGTTGGAGGGGCATACAATCATGCTGCCCCTAAAACACAAGCAACTTGCCGTACTGATCGTGCTGGTTTAATAGAATCTGCCCCATGGATACATGTTCCATATCCATTTCAATGGGGAGCCCCTACATTTGATGCAGGTGAAGCATTTGCCATGATGATGGCATCCTTTGTTTCTCTCGTAGAGTCCAGTGGTGCTTTTATTGCTGTCTATCGGTATGCAAGTGCAACACCGTTACCACCATCTATTCTTAGTCGCGGAATCGGTTGGCAGGGAGTTGCCATTTTGTTATCGGGATTGTTTGGAACGGGAAGTGGATCCTCTGTATCAGTAGAAAACGCTGGTCTTTTGGCTTTAACACGAGTAGGCAGCCGAAGGGTGGTGCAGATATCGGCTGGTTTTATGATTTTCTTTTCAATTCTTGGTAAATTTGGAGCTGTTTTTGCATCCATTCCACCTTCTATTGTTGCTGCACTGTACTGCTTGTTCTTCGCTTATGTTGGAGCGGGAGGTCTAAGTTTTCTTCAATTTTGCAACCTCAACAGTTTTAGAACAATTTTTGTACTAGGCTTCTCCATCTTCATTGGTCTGTCTGTGTCACAGTACTTCAATGAATACACAGTAATTAATGGTTATGGTCCAGTTAACACCAAAGCAAGATGGTTCAATGATATAATCAATGTCCCATTCCAATCAAAAGCATTTGTTGCGGGTTGCATGGCGTATTTCCTTGATAACACAATACATAAGAAGGATGGTGCTATTCGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGCTCCTTCAAGACTGACACAAGAAGTGAGGAGTTTTATTCACTGCCTTTCAACCTAAACAAATACTTCCCATCTGTGTAA 1602 0.4351 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYIVMLXTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVATTISIILASRFSDEPDPAEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPSVAKCIEIGLPQLILLVFVSQFVPHVLHAGKHVFERFTVLFTVAIVWLYAYLLTVGGAYNHAAPKTQATCRTDRAGLIESAPWIHVPYPFQWGAPTFDAGEAFAMMMASFVSLVESSGAFIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGSGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPSIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTIFVLGFSIFIGLSVSQYFNEYTVINGYGPVNTKARWFNDIINVPFQSKAFVAGCMAYFLDNTIHKKDGAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1660 533 MobiDBLite consensus disorder prediction 1 27 - -
Vra7g1660 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 533 - -
Vra7g1660 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra7g1660 533 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1660 Vra-Chr7 35107317 35113088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1660 9 533 Organic Solute Cotransporters AT5G49990 79.468 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1660 - - gmx:100791553 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1660 7 35107317 35113088 Vra7g1660 7 35107317 35113088 ECH
Vra7g1660 7 35107317 35113088 Vra5g0469 5 5118188 5124646 PCT