Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0469 ATGGCAGGAGGAGGAGCTCCAGCAAAATCAGATGAGCCACAGCCTCACCCTCCAAAGGATCAGCTTCCCAATATTTCTTACTGCATTACTAGTCCTCCTCCATGGCCCGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTCGGCACAACAGTGCTGATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATAATGAGAAGGCCAGAGTTATTGAAACGCTACTTTTTGTAGCTGGTATTAACACATTGTTGCAAACATTGTTTGGAACTCGACTGCCTGCAGTTATTGGAGGGTCTTACACCTTTGTTCCAACCACAATCTCTATTATCCTCGCTGGCCGATTCAGTGGTGAACCAGATCCTATAGAGAAATTTAAGAGGATAATGAGATCAATCCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTCAGTGGTCTTTGGAGGAATGTTGCAAGGTTCTTAAGCCCACTTTCATCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTACGAGTTAGGGTTCCCTGGGGTTGCTAAATGTGTAGAGATCGGGCTGCCTCAGCTTATATTGATCGTGTTTGTTTCACAGTATGTGCCTCACGTGCTACATTCGGGGAAAAATATCTTTGACAGATTTGCTGTGATATTTACTGTTGTAATTGTGTGGATATATGCTCATCTACTTACTGTTGGAGGTGCCTATAATGATGCTCCACCTAAAACTCAAATATCCTGCCGCACTGATCGTGCTGGACTTATAGATTCTGCTCCTTGGATAAGAATTCCATATCCCTTTCAATGGGGGGCACCTTCCTTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTTTATAGGTATGCAAGTGCAACACCATTACCACCATCTATTCTGAGCAGGGGTATTGGATGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTCAATGGATCTTCTGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACACGAGTTGGAAGTAGGAGAGTGGTGCAAATATCTGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTTGCCTCCATCCCACCTGCCATTATTGCTGCCCTCTACTGCTTGTTCTTTGCTTATGTTGGTGCTGGTGGTCTCAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAATTCATTTTAGGCTTCTCAATCTTCTTGGGCTTGTCTGTGCCACAGTACTTCAATGAGTACACAGCCATTAATGGTTATGGTCCAGTCAACACAGGCGCAAGATGGTTCAATGATATTATCAACGTGCCATTCCAATCAAAACCATTTGTTGCGGGTGTTGTGGCATATTTTCTGGACAACACTTTATTTAAGAGAGAAGGAAGCATTAGGAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTTCAAAGGTGACACAAGAAGTGAGGAGTTCTATTCACTGCCTTTCAATCTAAACAAGTACTTCCCCTCTGTTTAA 1596 0.4348 MAGGGAPAKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNNEKARVIETLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSGEPDPIEKFKRIMRSIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPQLILIVFVSQYVPHVLHSGKNIFDRFAVIFTVVIVWIYAHLLTVGGAYNDAPPKTQISCRTDRAGLIDSAPWIRIPYPFQWGAPSFDAGEAFAMMMAAFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPAIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGYGPVNTGARWFNDIINVPFQSKPFVAGVVAYFLDNTLFKREGSIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0469 531 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g0469 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra5g0469 531 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 531 - -
Vra5g0469 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0469 Vra-Chr5 5118188 5124646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0469 6 531 Organic Solute Cotransporters AT5G49990 79.087 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0469 - - gmx:100812585 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0469 5 5118188 5124646 Vra5g0469 5 5118188 5124646 ECH
Vra7g1660 7 35107317 35113088 Vra5g0469 5 5118188 5124646 PCT