Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1637 ATGGCCACCCAATCGCCGCCGCCGCCTTCCACTTCCACCGCCACGGACGAAAACCAAGGTTCTGAGACTGTGCAACTAGCCAATATGGATCAACAAAACACCAAAGAAGCAGAGCCTCCCAAACCTAGTTCAATTCCATCAGTATTTGTAAACTCACAACCGATGAGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTGTCTCACCCAAAAGTTAGAGGTTCACCTGTCATGTATAGGCGATCATTTTTAGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCGGCGAGTGCCAGATTCAGCTCCAACTGTGCAGACAGGTGGTGTAAATCAAGATGGGCAATTGAAATCATCATCAAACAATCAGCAACAAACTCAGCAAAAAACATTGCAGCCGGTTTCACCTGCTTCTACTGGTGTTAAAACTTCATCAGGAACATTACCACGCTCAAGATTTCACTGGTCTCATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAAATCTTTTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCCTTGACAATGATGATGAACAATTGAAGAAAACTGATGACAAACCAACATTGATGGAAGAAGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGAAGAAGTCGCAAAAGCGAGCCAAGAAATTCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTCTTAGACAAGCAAGTACAAGAAATGAAGTCAATGACAAATGCCATAAGAAGATTGGAAGGGCAAGAAGATCTTCAAATCAGTCAAACAAGTTCAAAGCAACTGGTTGTGAATGGCAAAGCGGATTATGACATGCGTTCAGTGAGATCTTCATCTCCACCTGCATCTGTTCAACCATCAAGTGGTCTTCATCCAAAGTCATATATGGAGCCTTGGGAGGTTGGTCAGGTGCAAAACACGTCTACTCAGATTCTTCAATCTCAAGTAAATGGTGAAGACCTGAATACCAAGACCCAGGATACGTCTCTAGTAAATGGGGATGACCCATTGCCCTGGTGGCAGAGGAAAAATGTTAGAATCACAGAGATTGAGAATGAAAATGAGTCTAATGAAGTACCTTATGCTGCTGCATACAGTCAGCTGCCAGTTCAACGTGTATGGGTTCCTCCTCAACCTCCACCCATAGCCATGCCTGGGGCTGCAGAAGCTATCAGACGCCCAAAGCAGGTGGCCCAAAAGGAACAGAGGTCAGATAATCAGTCAGTGGCTCAATCTTCTGACAGCTCTGATGACATTCAAGGGGTCTCAAAACCATTGGAATCTGGAGGTGCAGTAGAGGGCAGCAGTGTCAGCTCAGTTCCCAGCTCCAGTGAGATACAAGAGGAGCATGAAGTCCAATATGATGAGAAATAA 1452 0.4483 MATQSPPPPSTSTATDENQGSETVQLANMDQQNTKEAEPPKPSSIPSVFVNSQPMREEQVQNAVKFLSHPKVRGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQDGQLKSSSNNQQQTQQKTLQPVSPASTGVKTSSGTLPRSRFHWSHALIAVGLLAASGAGTAIIIKKSFLPRLKSWIRKVVLDNDDEQLKKTDDKPTLMEEAAQAAKSAAAAAEEVAKASQEILASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLQISQTSSKQLVVNGKADYDMRSVRSSSPPASVQPSSGLHPKSYMEPWEVGQVQNTSTQILQSQVNGEDLNTKTQDTSLVNGDDPLPWWQRKNVRITEIENENESNEVPYAAAYSQLPVQRVWVPPQPPPIAMPGAAEAIRRPKQVAQKEQRSDNQSVAQSSDSSDDIQGVSKPLESGGAVEGSSVSSVPSSSEIQEEHEVQYDEK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1637 483 MobiDBLite consensus disorder prediction 1 56 - -
Vra7g1637 483 MobiDBLite consensus disorder prediction 404 483 - -
Vra7g1637 483 Coils Coil 216 236 - -
Vra7g1637 483 MobiDBLite consensus disorder prediction 458 473 - -
Vra7g1637 483 MobiDBLite consensus disorder prediction 98 151 - -
Vra7g1637 483 Gene3D - 48 110 IPR036388 -
Vra7g1637 483 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 15 323 IPR025655 GO:0005515|GO:0005778|GO:0016560
Vra7g1637 483 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 323 471 IPR025655 GO:0005515|GO:0005778|GO:0016560
Vra7g1637 483 Coils Coil 255 275 - -
Vra7g1637 483 MobiDBLite consensus disorder prediction 427 448 - -
Vra7g1637 483 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 323 471 - -
Vra7g1637 483 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 15 323 - -
Vra7g1637 483 MobiDBLite consensus disorder prediction 107 151 - -
Vra7g1637 483 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1637 Vra-Chr7 34833982 34842670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1637 K13343 - gmx:100784152 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1637 7 34833982 34842670 Vra5g0503 5 5896308 5903785 PCT