Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1613 ATGGAGCAATACTGGTCTGGAAGTGCCCTCAACGAGAACAAAGGAATGGTAGATAATTTGCAGAGTTATGGAATTATTACTTCCAGAAAGGTAGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTGCCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATAGGCTACAATGCTACTATCTCTGCGCCACATATGCATGCAACGTGCCTTCAGTTGCTGGAGAAGAATTTGCAGCCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTCACTGGATGCTTTGCCTTGATGGTAGGACCTCAAGGCCGTGCTGTTGGCGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCACTAAAAGATGGTTCCCTTTCAGTGCATTGTGGTGATGGGAGGCAAGGTTGGCCTGATTTTGCTCCATATGATGCCATTCACGTGGGAGCAGCGGCACCAGAAATTCCTCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGAATGGTTATTCCTGTTGGGAACATATTTCAAGATTTAAAGGTCTTGGACAAGAACTCCGATGGTTCTATCAGTATCCGGACTGAGACTTCAGTTCGGTATGTGCCTCTCACTAGCAGAGAAGCTCAGTTACGTGGTTAG 690 0.4594 MEQYWSGSALNENKGMVDNLQSYGIITSRKVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRALDVGSGTGYLTGCFALMVGPQGRAVGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHCGDGRQGWPDFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVLDKNSDGSISIRTETSVRYVPLTSREAQLRG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1613 229 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Vra7g1613 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 229 - -
Vra7g1613 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Vra7g1613 229 CDD AdoMet_MTases 86 189 - -
Vra7g1613 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Vra7g1613 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 200 IPR029063 -
Vra7g1613 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 229 IPR000682 GO:0004719|GO:0036211
Vra7g1613 229 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1613 Vra-Chr7 34577838 34580555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1613 K00573 - gmx:100527082 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1613 7 34577838 34580555 Vra7g1613 7 34577838 34580555 ECH
Vra7g1613 7 34577838 34580555 Vra5g0712 5 11574229 11576711 PCT