Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0712 ATGAGCGTGCACTTCCACTACTACCCTTTCCCACGGTTGGCTTATGGTTGCAACTATTACGCTTCTTATGCAACAAAACGCACTCTCTGCAACCGCCGTCGTGTTCCACCGCACTCTTCCAGCTTCTCCGCCATCACCAATCTTTTCTTCCAAAACCCTAATTTCATCACGGGGAACACACTCTTCCTTAGGATGAAGTGCCCTCTTACCAAGAGGAGAAAGAAAAGAGAAATGATAGATAACGAAATGCGATTTTGCCCTGTGAGTGGCACGAGTAAGATCAAAGCGATGGTGGAGAGGTTGCAGCGATGTGGAGTGATCACATCAAGTAAAGTGGCTGAAGTAATGGAGAAAGTTGACAGAGCGTTGTTTGTACCTGATGGAGCTGAGCCTTATGATGACAGTCCCTTGGCCATAGGATACAATGCCACTATATCTGCCCCGCATATGCATGCCATTTGTCTTCAGTTGCTTGAGGATAAGTTGCAGCCTGGGATGCGTGCTTTGGACGTGGGCTCTGGAACGGGGTATCTGACGGCGTGCTTTGCCTTGATGGTTGGACCCCAAGGACGTGCTGTTGGTGTAGAGCATATTCCTGAATTGGTTTCTTCTTCAATTGAGAATATTCAGAAAAGTGCTGCTGCCACACAATTGACAGATGGATCCCTTTCTATTCATGCTGGTGATGGGAGGGAAGGTTGGCCAGAGTTTTCACCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAACCACTTATTGACCAGCTGAAGGCAGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGGACTGAGACGTCTGTTCGTTACGTTCCCCTCACTAGTCGAGAAGCTCAACTGGGAACTTATTAA 936 0.4722 MSVHFHYYPFPRLAYGCNYYASYATKRTLCNRRRVPPHSSSFSAITNLFFQNPNFITGNTLFLRMKCPLTKRRKKREMIDNEMRFCPVSGTSKIKAMVERLQRCGVITSSKVAEVMEKVDRALFVPDGAEPYDDSPLAIGYNATISAPHMHAICLQLLEDKLQPGMRALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSIENIQKSAAATQLTDGSLSIHAGDGREGWPEFSPYDAIHVGAAAPEIPQPLIDQLKAGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLGTY* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0712 311 CDD AdoMet_MTases 167 270 - -
Vra5g0712 311 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 92 307 IPR000682 GO:0004719|GO:0036211
Vra5g0712 311 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 310 - -
Vra5g0712 311 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 228 243 IPR000682 GO:0004719|GO:0036211
Vra5g0712 311 Gene3D Vaccinia Virus protein VP39 88 311 IPR029063 -
Vra5g0712 311 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 95 305 - -
Vra5g0712 311 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 310 IPR000682 GO:0004719|GO:0036211
Vra5g0712 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 279 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0712 Vra-Chr5 11574229 11576711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0712 K00573 - gmx:100810913 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0712 5 11574229 11576711 Vra5g0712 5 11574229 11576711 ECH
Vra7g1613 7 34577838 34580555 Vra5g0712 5 11574229 11576711 PCT