Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1575 ATGGCGGTGGAGTACACATGCTGCACATCGCAGTTCTTCGTTCACATACTCGTGATCGTGCTGCTGGTGCTGTTCGCGGGCCTCATGTCGGGCCTCACGTTGGGCCTCATGTCGCTCAGCCTTGTTGATCTGGAGGTCCTCGCTAAGTCTGGTACTCCTCAAGATCGTAAGCACGCTGCGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTTTGTACTCTGCTAATTTGCAATGCTGCAGCCATGGAGGCACTTCCTATTTTTCTCGATAGTCTTGTTACTGCATGGGGTGCTATCCTTATTTCGGTGACATTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTATGTTCTCGGTATGGTTTGGCTATTGGTGCAGCAGTGGCTCCCTTTGTCCGGGTGCTTGTATGTGTATGCTTTCCGGTTGCCTTTCCAATTAGTAAGTTGTTGGATTATTTGCTGGGCCATAGACACGAGGCCTTGTTCCGTAGAGCTGAGTTGAAGACACTTGTAAATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTGACGCATGATGAAACAACTATCATTGCTGGGGCACTTGAACTCAGCGAGAAGACAGCTAGTGATGCCATGACTCCTATAGCTGAAACATTTGCTGTTGATATTAATTCGAAGCTTGATAGGGAACTGATGAATGAAATATTGGAGAAAGGGCACAGCAGAGTCCCAGTCTTCTATGAGCAGCCTACAAACATTATAGGACTTATACTGGTGAAAAATTTATTGACTGTTCATCCGGAAGATGAAGCATCCGTGAAGAGTGTAACTATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAATTCCAGAAGGGCCATAGCCACATGGCAGTTGTTGTGAGACGGTGTGACAAGACGAAGCAGCAATCCTCCCAAAATAATGCAAACGACTCGGTGAGAGATGTGAAGGTGGATATTGATGGTGAAAAGCCTCCCAAAGAGAAACCTTTGAAATCCAAGGTGCCACTCCATAAGTGGAAAAGCTTCCCAAATACAAACATGTCAAATAGGGTTGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCAGATATTTTGGAAATAGATGGAAGTCCCCTTCCTAAGCTCCCTGAAGAAGAAGAAGCTGTTGGAATTATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAAACAGATCATCATTTTGAAGACTCATGA 1278 0.4413 MAVEYTCCTSQFFVHILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGAAVAPFVRVLVCVCFPVAFPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPIAETFAVDINSKLDRELMNEILEKGHSRVPVFYEQPTNIIGLILVKNLLTVHPEDEASVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKTKQQSSQNNANDSVRDVKVDIDGEKPPKEKPLKSKVPLHKWKSFPNTNMSNRVGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1575 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Vra7g1575 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Vra7g1575 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Vra7g1575 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Vra7g1575 425 MobiDBLite consensus disorder prediction 310 344 - -
Vra7g1575 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Vra7g1575 425 MobiDBLite consensus disorder prediction 326 344 - -
Vra7g1575 425 Gene3D - 376 417 IPR046342 -
Vra7g1575 425 Gene3D - 191 325 IPR046342 -
Vra7g1575 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Vra7g1575 425 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1575 Vra-Chr7 34053351 34058870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1575 K16302 - gmx:100801937 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1575 7 34053351 34058870 Vra7g1575 7 34053351 34058870 ECH
Vra7g1575 7 34053351 34058870 Vra10g1430 10 19385768 19388936 PCT