Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1526 ATGGAAGAGGTGGAGCAGGTCAAAGCAGAGGCATTGCAGATAATGGGAGTTTTTCAACTTCTTCCGAAGCTCGTCGTCTTCGATCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGCTCGAAGCACGATACGCCTTATTTGTTTCCTCATTCTAGAGGCATTTTGCATGCGCTCAAACGCCAGAACGTTCATGCTGCAATTGCTTCCAAGTCACCAACTCCTGACATTGCAACCACGTATCTTGACAAGCTCGGCATCAGGTCAATGTTTGTCGCCGAGGAAATATTTTACAGCTGGACACACAAAACAGATCATTTTCAGAAAATTCATTTAAAGACTGGGATCCCCTATAACTCCATGCTATTCTTTGACGATGATAATAACAACATCCAAGAGATCTCAAAAATTGGAGTAACAAGTATTTTGGTCAGAAATGGGGTAAATCTTGAAGCATTTAGAAACGGCCTCGCAAAGTTTTCTCAAAACGGGAATGCATCAAAGAAGAACAAGCAGAAAAGGCCCAAGTAA 534 0.427 MEEVEQVKAEALQIMGVFQLLPKLVVFDLDYTLWPFYCECRSKHDTPYLFPHSRGILHALKRQNVHAAIASKSPTPDIATTYLDKLGIRSMFVAEEIFYSWTHKTDHFQKIHLKTGIPYNSMLFFDDDNNNIQEISKIGVTSILVRNGVNLEAFRNGLAKFSQNGNASKKNKQKRPK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1526 177 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 170 - -
Vra7g1526 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE-LIKE PROTEIN 1 176 - -
Vra7g1526 177 Pfam Acid Phosphatase 21 41 IPR010036 GO:0016791
Vra7g1526 177 Pfam Acid Phosphatase 49 163 IPR010036 GO:0016791
Vra7g1526 177 SFLD C1.5.2: MDP Like 5 170 - -
Vra7g1526 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 176 IPR010036 GO:0016791
Vra7g1526 177 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 23 138 IPR010033 -
Vra7g1526 177 Gene3D - 5 167 IPR023214 -
Vra7g1526 177 CDD HAD_MDP-1_like 22 145 IPR035679 -
Vra7g1526 177 SUPERFAMILY HAD-like 22 153 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1526 Vra-Chr7 32972153 32974319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1526 K17619 - gmx:100795199 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1526 7 32972153 32974319 Vra7g1526 7 32972153 32974319 ECH
Vra7g1526 7 32972153 32974319 Vra10g1470 10 19676561 19677775 PCT