Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1470 ATGGAGGAGAAGACGGAGAAGGTGAAGGGTGAGGCGCTGCAGATAATCGAAGCGTTTGAGGTTCCGCCAAAGCTCGTGGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAATGCCCTCTCTCTATCCTCACGCCAAAGGCATATTGTTAGCGCTCAAAGAGAAAGGCATCGACGTTGCAATCGCTTCTCGCTCACCAACCGCTGACATAGCAACAGCTTTCCTCAACAAATTGGGACTCTCCTCACTCTTCGTCGCACAGGAAATATATTCCAGTTGGACACATAAAACAGATCATTTCCAGAGGATTCATTCGAGAACCGCTGTCCCCTTCAACTCCATGCTCTTTTTCGATGATGAGAATAGAAACATCCAATCGGTCTCTAAAATGGGAGTAACTAGCATTTTGGTTGGAGATGGGGTAAATCTTGGGTCGTTAAGGGAAGGTCTTATTCAATTCTCTCGAAACTGGAACGCTTCACAGAAGAACAAACAGAAATGGCTTTCCAAGTACTCTAACAAGCCAGATACTTCCAACCCTGCTGCATGA 576 0.4635 MEEKTEKVKGEALQIIEAFEVPPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTADIATAFLNKLGLSSLFVAQEIYSSWTHKTDHFQRIHSRTAVPFNSMLFFDDENRNIQSVSKMGVTSILVGDGVNLGSLREGLIQFSRNWNASQKNKQKWLSKYSNKPDTSNPAA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1470 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1-LIKE 6 179 - -
Vra10g1470 191 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 24 139 IPR010033 -
Vra10g1470 191 CDD HAD_MDP-1_like 23 146 IPR035679 -
Vra10g1470 191 Pfam Acid Phosphatase 23 164 IPR010036 GO:0016791
Vra10g1470 191 Gene3D - 4 169 IPR023214 -
Vra10g1470 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 6 179 IPR010036 GO:0016791
Vra10g1470 191 SFLD C1.5.2: MDP Like 5 171 - -
Vra10g1470 191 SUPERFAMILY HAD-like 23 153 IPR036412 -
Vra10g1470 191 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1470 Vra-Chr10 19676561 19677775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1470 K17619 - gmx:100305763 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1526 7 32972153 32974319 Vra10g1470 10 19676561 19677775 PCT