Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1385 ATGAGCAGTGGGGAGCTCCTCAACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAACTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACCGACGCCTATGTCGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACTGGAATTGTCATGCCGCGATCTACTTGTGATGTTATGGTTACTATGCAAGCACAAAAAGAGACTCCGCCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACCGTTGATGGTGCCAGTCCGAAGGACATCACTCCGGAAATGTTCAACAAGGAGGCGGGGCATGTGGTTGAGGAGAGCAAATTGAGAGTGGTGTACGTTTCTCCTCCTCAACCACCGTCTCCAGTACCAGAAGGTTCTGAGGAAGGATCCTCACCAAGAGGTTCTGTTTCAGAGAATGGAAATGCCAACGGTTCTGACTTCACACAAGTAGTGAGAGGGTTTACAGAGCGACCTGAGGCTCAAGACAAATTGGCAGAGGCTAGAGCTCTTATCTCAAGACTGACTGAAGAAAAGAATAATGCAATTGAACAAAATAGCAAGCTTCGCCAGGAACTGGATCTACTGAAGCGGGAAGACAACAAAAGTCGTGGAGTATCATATGTCATTGTCGTATTAATTGGCTTACTAGGCATAATAATGGGGTACCTCTTGAAGAAGACCTAA 723 0.455 MSSGELLNIEPLELKFPFELKKQISCSLQLSNKTDAYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVMVTMQAQKETPPDMQCKDKFLLQSVKTVDGASPKDITPEMFNKEAGHVVEESKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQVVRGFTERPEAQDKLAEARALISRLTEEKNNAIEQNSKLRQELDLLKREDNKSRGVSYVIVVLIGLLGIIMGYLLKKT* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1385 240 MobiDBLite consensus disorder prediction 126 159 - -
Vra7g1385 240 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 238 IPR016763 GO:0005789
Vra7g1385 240 Coils Coil 170 211 - -
Vra7g1385 240 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 238 - -
Vra7g1385 240 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Vra7g1385 240 SUPERFAMILY PapD-like 2 141 IPR008962 -
Vra7g1385 240 PIRSF VAMP_assoc_prot 1 239 IPR016763 GO:0005789
Vra7g1385 240 MobiDBLite consensus disorder prediction 143 159 - -
Vra7g1385 240 Gene3D Immunoglobulins 2 130 IPR013783 -
Vra7g1385 240 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1385 Vra-Chr7 30972016 30975125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1385 - - gmx:100527687 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1385 7 30972016 30975125 Vra7g1385 7 30972016 30975125 ECH
Vra7g1385 7 30972016 30975125 Vra11g0416 11 3017700 3021624 PCT