Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1298 ATGGCAGAGTTTCCAGGATATATTCGTTACTGCTTGAACACAGGGAAGCTTCTCCTTTTAGCAGTTTTGGTCTCTGGAGGAGTTGTCTTGCACATTTTGGCATGTGCGTTATATAAAAATTGGTGGCCAATGCTAACTGCGATAACATATGTGATTCTTCCAGTACCTTTGCTCTTCTATGCGGGATCTGAACGTTCTTCTGTATTTTCTGACTCAGATAACACCTGGGTGAATGCAACCAAGTTCATAAGTGGGGCATCAGCAGTTGGAAGCATTGCCATTCCAGCCATATTAAAGCATGCTGGTGTTATCAGTTGGGGAGCCCTTGCTATGGAACTCTCTTCATTCTTTGTGTTTGTATCTGCCATAATGTGTTACATAAGGATGAATGATAACGATGATTATAGTATTCTTTGA 417 0.4125 MAEFPGYIRYCLNTGKLLLLAVLVSGGVVLHILACALYKNWWPMLTAITYVILPVPLLFYAGSERSSVFSDSDNTWVNATKFISGASAVGSIAIPAILKHAGVISWGALAMELSSFFVFVSAIMCYIRMNDNDDYSIL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1298 138 Pfam Vacuolar protein sorting 55 18 133 IPR007262 -
Vra7g1298 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Vra7g1298 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1298 Vra-Chr7 29825590 29826709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1298 1 134 EF-hand Containing Proteins AT1G32410 62.687 2.65e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1298 - - gmx:100775400 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0448 11 3313525 3315534 Vra7g1298 7 29825590 29826709 PCT