Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0448 ATGTCAGACTTACCAGGATATATGCGTATCTGTTTGAACACAGGGAAGCTTCTTTCATTGGCAATATTGGTCTCTGGAGGAATCGTCTTGCAAATTTTGGCATGTGTCTTGTATAATAATTGGTGGCCGATGCTAAGTGTGTTAACATATGTGCTTCTACCAATGCCTTTGCTGTTCTTTGCTGGGTCTAATGACTCTATATTCTCCGAATCTGATAATAGCTGGGTGAATTTTACTAAGTTCTTGACCGGAGCCTCAACTGTGGGAGGCATTGCCATTCCAAGCATATTGAAGCATGCAGGAGTTATTGGTTGGGGAGCCTTTGCAATGGAACTTTCTTCCTACTTCGTGTTTGGACTGACTGTAATATGTTACCTTTGGATGGGTGATGAAGATGAATACAGTATACTCTGA 414 0.4155 MSDLPGYMRICLNTGKLLSLAILVSGGIVLQILACVLYNNWWPMLSVLTYVLLPMPLLFFAGSNDSIFSESDNSWVNFTKFLTGASTVGGIAIPSILKHAGVIGWGAFAMELSSYFVFGLTVICYLWMGDEDEYSIL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0448 137 Pfam Vacuolar protein sorting 55 18 132 IPR007262 -
Vra11g0448 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Vra11g0448 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0448 Vra-Chr11 3313525 3315534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0448 1 133 EF-hand Containing Proteins AT1G32410 67.910 3.15e-63 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0448 - - gmx:100500037 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0448 11 3313525 3315534 Vra7g1298 7 29825590 29826709 PCT