Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1293 ATGGCCTGCTTAGAACTCTCCAAAGAGGTAAAGTTCAAAGATGACACTGAAGAGTTAACTCTTGATGGAAGTGTTGATTGGCATGGTCGTCCGGCAATCAGAGCCAAATCTGGGAGATGGGTTGCTGGAACCATAGTGCTATTGAACCAAGGTCTGGCAACCTTAGCATTCTTTGGAGTAGGAGTGAACCTAGTGTTATTCCTGACAAGAGTGATGGGGCAGAACAATGCTGATGCTGCAAACAGTGTTAGCAAATGGACTGGAACAGTATACATCTTCTCTCTTGTGGGTGCCTTCCTAAGTGACTCTTACTGGGGAAGGTACAAAACTTGTGCAGTCTTTCAGGTCATTTTTGTGATAGGCCTGGTGTCCTTGTCCCTTTCATCGTACATCTCCTTGATTAGGCCGAAAGGTTGTGGAAATGAAACTATTTCATGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTCTCGATCTATCTCATTGCTTTGGGGAATGGAGGGTATCAGCCAAATATCGCCACATTTGGAGCTGACCAGTTTGACGAGGAGCACTCAAAGGAGGGTTATTCAAAGGTTGCCTTCTTTAGCTACTTCTACTTGGCTTTGAACCTTGGTTCACTCTTCTCAAACACAATTCTGGGATACTTTGAAGATGAAGGATTGTGGGCACTTGGGTTCTGGGCGTCTGCGGGTTCTGCTTTTGCTGCCCTTGTTTTATTTCTTCTTGGGACCCCAAGATATAGACACTTCAAACCCAGTGGCAATCCTCTTTCAAGGTTCGGCCAAGTCCTTGTTGCTGCATTAAGGAAATGGGGAGCTCATACGACATCAAATGAAGAGGATCTATATGTCATGGATGAAAATGAATCTCCCACTAATGGCAACAGAAAGATTCTTCACACCGACGGATTCAAGTTTCTGGACAGAGCAGCATTTATATCTACCAGAGATCTAGAAGACCAAAAAAGAGGCCTTCATAACCCCTGGCGTCTCTGTCCTATAACTCAAGTTGAAGAAGTGAAGTGTATACTAAGACTTCTTCCAATTTGGCTCTGCACCATAATCTACTCAGTGGTTTTCACACAAATGGCTTCTCTTTTTGTAGAACAAGGAGCTGCCATGAAAACTACAATTTCCCATTTTAGAATACCGCCTGCAAGCATGTCTAGCTTTGACATCCTCAGCGTAGCAGTCTTCATTTTCTTCTACCGTAGAGTGATTGATCCACTAGTGGGACGACTTAAAAAGACAAGTTCCAAAGGTCTTACTGAGCTTCAGAGAATGGGAATTGGGCTTGTTATAGCTGTAATGGCAATGGTTTCAGCTGGAATAGTTGAATGCTACAGGCTTAAATATGCAAAATCAGGATGCCCCCACTGCAGTGGGACAAGCTCTCTAAGCATCTTTTGGCAAATTCCTCAATATGCACTTATCGGAGCTTCTGAAGTTTTTATGTATGTAGGCCAGCTAGAGTTCTTCAATGCTCAAACACCAGATGGTTTAAAAAGCTTTGGAAGTGCCCTTTGCATGACGTCCATCTCTCTTGGGAACTATGTAAGTAGCTTAATTGTTAGTATCGTTATGAAGATCTCCACCGAGGATCACATGCCAGGGTGGATCCCTGGAAACTTAAACAGAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCTGCCTTGACATCAATAGACTTGATCGTTTATATTGTATGTGCAAAGTGGTTCAAGAGTATACAGCTGGAAGGGAAATACGAAGAGAATGATATGCCTGGTAGCTATAAAGTATAA 1794 0.4326 MACLELSKEVKFKDDTEELTLDGSVDWHGRPAIRAKSGRWVAGTIVLLNQGLATLAFFGVGVNLVLFLTRVMGQNNADAANSVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLVSLSLSSYISLIRPKGCGNETISCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFAALVLFLLGTPRYRHFKPSGNPLSRFGQVLVAALRKWGAHTTSNEEDLYVMDENESPTNGNRKILHTDGFKFLDRAAFISTRDLEDQKRGLHNPWRLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISHFRIPPASMSSFDILSVAVFIFFYRRVIDPLVGRLKKTSSKGLTELQRMGIGLVIAVMAMVSAGIVECYRLKYAKSGCPHCSGTSSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFYFLLAALTSIDLIVYIVCAKWFKSIQLEGKYEENDMPGSYKV* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1293 597 PANTHER PEPTIDE TRANSPORTER 15 586 - -
Vra7g1293 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1293 597 SUPERFAMILY MFS general substrate transporter 31 584 IPR036259 -
Vra7g1293 597 CDD MFS_NPF7 40 576 - -
Vra7g1293 597 Pfam POT family 108 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1293 597 Gene3D MFS general substrate transporter like domains 11 584 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1293 Vra-Chr7 29729146 29734744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1293 1 591 Organic Solute Cotransporters AT1G32450 76.303 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1293 K14638 - gmx:100808276 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0459 11 3386960 3392509 Vra7g1293 7 29729146 29734744 PCT