Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0459 ATGTCTCAGCTCTGCAAAGAGAGCAAGTTTGAGGAAGAAGCAGAAGAGGTTACTCTTGATGGAAGTGTTGATTTTCATGGTGGTCCTGCTATAAGAGCCAAATCTGGAAGATGGGTTGCTGGAATTATCATACTCTTGAATCAAGCTCTGGCAACCCTTGCATTCTTTGGGATGGGAGTGAACCTAGTGCTGTTTCTGACAAGGGTGGTAGGACAGAATAATGCTGATGCAGCTAACAATGTGAGTAAATGGACCGGAACAGTTTATATCTTCTCTCTTGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGATATAAAACTTGTGCTGTCTTTCAGGTCATCTTTGTTATAGGTCTGATGTCCTTATCCCTGTCATCATATCTATTCTTACTTAAGCCTAAAGGTTGTGGGAATGAAACAATTCATTGCGGAAAACATTCAAGATTGGAGATGGGAATGTTTTACCTCTCAATATATCTAGTTGCCTTGGGTAATGGAGGTTACCAACCAAATATTGCCACATTTGGAGCTGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTCACTCTAAGGTGGCCTTCTTTAGCTACTTCTACCTGGCTTTTAATATCGGCCAACTTTTCTCAAACACCATTCTGGTCTATTTCGAGGACGAAGGAATGTGGGCTCTTGGTTTCTGGCTGTCTGCAGGTTCCGCCTTTGCTGCACTGGTCTTGTTTCTTGCATGCACCTCCAGGTATAGACACTTCAAGCCCAGTGGCAACCCTCTTTCCAGGTTCAGCCAAGTCGTTGTGGCTGCATCAAGGAAATCCAAAGTTCAAATGTCATCAAATGGAGAGAACTTACTTCACATGGATGCAAAGGAGTCTTCCACGAATGGCAACAGAAAGATTCTCCACACTCATGGGTTCAAGTTCTTGGACAGGGCAGCATTTATATCTTCAAGAGATCTAGATGATCAGAAAGGGGACGTTTACAACCCCTGGCGCCTCTGTCCAGTAAGTCAAGTTGAAGAGGTGAAGTGCATACTGAGACTTCTTCCAATTTGGCTCTGCACCATAATATACTCTGTGGTTTTCACACAAATGGCTTCACTTTTTGTGGAGCAAGGCGCTGCCATGAAAACCACTGTCTCCAATTTCAGAATACCACCAGCTAGCATGTCCAGCTTTGATATACTCAGTGTGGCAGTTTTCATTTTCTTCTACCGCCGAGTTCTTGATCCGTTTGTGGGAAAACTCAAAAAGACAGATTCCAAGGGACTCACAGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCAGTACTGGCAATGGTTTCAGCTGGATTAGTTGAATGCTATAGACTTAAGTACGCAAAACAAGAATGCCTCCACTGCAATGACACAAGCACTTTAAGTATCTTCTGGCAGATCCCTCAGTACGCATTTATAGGAGCTTCCGAGGTTTTTATGTATGTAGGCCAGTTGGAGTTCTTCAACGCTCAGACACCAGACGGCTTAAAGAGCTTCGGAAGTGCACTTTGCATGACATCCATTTCTCTTGGGAACTATGTGAGTAGCTTACTAGTTAGTGTGGTTATGAAGATATCCACCGAAGATCACATGCCAGGGTGGATCCCTGGAAACCTCAATAAAGGTCACTTGGATAGGTTTTACTTCCTCTTAGCTGCCTTGACGTCCATAGATTTGATTGCCTATATTGCATGTGCAAAATGGTACAAGTGCATACAGCTAGAGGAGAAAAGTGACGAAAATAATGAGTCAAAAGTATAA 1779 0.4351 MSQLCKESKFEEEAEEVTLDGSVDFHGGPAIRAKSGRWVAGIIILLNQALATLAFFGMGVNLVLFLTRVVGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLLKPKGCGNETIHCGKHSRLEMGMFYLSIYLVALGNGGYQPNIATFGADQFDEEHSKEGHSKVAFFSYFYLAFNIGQLFSNTILVYFEDEGMWALGFWLSAGSAFAALVLFLACTSRYRHFKPSGNPLSRFSQVVVAASRKSKVQMSSNGENLLHMDAKESSTNGNRKILHTHGFKFLDRAAFISSRDLDDQKGDVYNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKTDSKGLTELQRMGVGLVIAVLAMVSAGLVECYRLKYAKQECLHCNDTSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSIDLIAYIACAKWYKCIQLEEKSDENNESKV* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0459 592 Gene3D MFS general substrate transporter like domains 9 584 IPR036259 -
Vra11g0459 592 Pfam POT family 106 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g0459 592 PANTHER PEPTIDE TRANSPORTER 14 584 - -
Vra11g0459 592 CDD MFS_NPF7 38 574 - -
Vra11g0459 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g0459 592 SUPERFAMILY MFS general substrate transporter 32 586 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0459 Vra-Chr11 3386960 3392509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0459 6 590 Organic Solute Cotransporters AT1G32450 74.660 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0459 K14638 - gmx:100776457 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0459 11 3386960 3392509 Vra7g1293 7 29729146 29734744 PCT