Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1082 ATGGCACCTTCTTTCTGCGTTAATGAGAGAAAGGTATGTGTGAGATGGGTGGAGAAATATTTCAAAGATTGCCTCTGCAATATGAAGGATGAAATCTCGTTCGGTTTGGGTCTCACAAGTCTAGTATTCTGGGGAGTAGCTGAAATTCCTCAAATAATAACCATTTTTCGTACTAAGAAAAGCCATGGAGTATCCCTCATCTTTCTCCTCACTTGGGTCGCTGGGGATATATGCAATTTGACTGGTTGCCTTCTCGAACCAGCTACTTTGCCAACACAGTATTACACAGCTCTGCTTTACACAATCACTACGATCGTATTACTTCTGCAAATCATATATTACGACTACATAAGCAATTGGTACAAACATCCTCAGAAGGTCAACAACAAAAGGGATGAAGAAGATGAGAGAAAACCATTGAAGGCACCGAAGCCAGCCTACGAGTCTGGAATTCCAATACCAAATGGCACACGCAAAGCAGTAGCTAGACAGGAGCACTATTATATGTCAGCAAGATCATTGGCTGGAAGTGGCACTCCACCCTGGGGAACTTACATGAGAGCTGCTAAAAGTGGTCCTTCAACCATGGAATCCATAGATGCCTCTTCTTCCGAGGATGATGAAGCTTATCCCCCAATCAAGGCTAGGCCAATCCAACGTCCTGCAGTTGGAAGTTATGGTACATTTCTAGCAGCTGCTGTTAGTTTGCCTCTCAAGGCTGATGCTTTGAGGGAAGGGTACATGAGATTTGCTGGAAGAAAACTTTTGCAGGAATACGAGACACATAGTACATTGGGTCAATGGTTAGGATGGCTCATGGCTGCTATCTATATAAGTGGTCGGCTTCCTCAAATATGGTTGAACATTAAAAGAGGCAGTGTGGAGGGCTTAAATCCTTTCATGTTCGTCTTTGCATTGGTAGCTAATGTCACCTACGTGGGAAGTATTCTTGTGAGAACTACAGAAATGCAAAGCATCAAAGCTAATATGCCCTGGTTATTGGATGCGGTATTGTGCGTGGCATTGGACCTTTTCATAATAATGCAGTACATCTACTATAGATACTTTCGAAGGAGAGAAGGAAAAGGAGACAACTACAAAGAAGAAAGAGCTGCATCAGCTTGA 1125 0.4302 MAPSFCVNERKVCVRWVEKYFKDCLCNMKDEISFGLGLTSLVFWGVAEIPQIITIFRTKKSHGVSLIFLLTWVAGDICNLTGCLLEPATLPTQYYTALLYTITTIVLLLQIIYYDYISNWYKHPQKVNNKRDEEDERKPLKAPKPAYESGIPIPNGTRKAVARQEHYYMSARSLAGSGTPPWGTYMRAAKSGPSTMESIDASSSEDDEAYPPIKARPIQRPAVGSYGTFLAAAVSLPLKADALREGYMRFAGRKLLQEYETHSTLGQWLGWLMAAIYISGRLPQIWLNIKRGSVEGLNPFMFVFALVANVTYVGSILVRTTEMQSIKANMPWLLDAVLCVALDLFIIMQYIYYRYFRRREGKGDNYKEERAASA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1082 374 SMART ctns 279 310 IPR006603 -
Vra7g1082 374 SMART ctns 46 77 IPR006603 -
Vra7g1082 374 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 368 - -
Vra7g1082 374 Gene3D - 265 365 - -
Vra7g1082 374 Gene3D - 35 124 - -
Vra7g1082 374 MobiDBLite consensus disorder prediction 127 143 - -
Vra7g1082 374 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 368 - -
Vra7g1082 374 MobiDBLite consensus disorder prediction 127 148 - -
Vra7g1082 374 Pfam PQ loop repeat 265 319 IPR006603 -
Vra7g1082 374 Pfam PQ loop repeat 32 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1082 Vra-Chr7 26437254 26441063 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1082 K23678 - gmx:100789634 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0645 11 5161365 5164956 Vra7g1082 7 26437254 26441063 PCT