Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1081 ATGACCCTGGACGCGGCATACCTCCGAGGATCCATGGCGGCAATCCTCTCCGTGCTCCAACACAGTTCATGCCCAGAAAACATGATCTTCCACTTCCTCTCCGCAGCTTCCAAACCTTCCTCCTTCTCTACCCTAAACCAAACACTAACTAATTCCTTTCCTTATTTGAATTTCCAAATTTATCCCTTCGACGACATCGCGGTTTCGCGCCTCATCTCCACCTCCATACGCTCCGCGCTGGACACGCCCCTCAATTATGCGCGAAGTTACCTTGCAGACCTCCTCCCTCGCTGCATCGTCAGAGTCGTATACCTTGATTCCGACTTAATCCTTGTTGACGACATCGCCAAACTCGCCGCCACGCCGCTCAGCGACACGGAGGTCCTAGCCGCGCCGGAGTACTGTTCCGCCAACTTCTCGACCTACTTCACGCCCTCATTCTGGGCCAACCCCTCGCTATCGCTGACCTTCTCGAACCGGAAGCGGCCGTGCTACTTCAACACCGGCGTTATGGTGATCGACCTACAGCGGTGGCGGGCCGGGGACTACACAACAGTCATCGAAGAGTGGATGGAGTTGCAGAAGAGGATGCGGATCTACGAGCTCGGGTCGCTTCCGCCATTCCTGCTGGTCTTCGCCGGAAGGATTACGGCGGTGGATCGCCGTTGGAATCAGCACGGACTCGGCGGGGACAATTTTCGTGGGCTTTGCCGGGAACTGCATCCCGGGCCCGTGAGTCTGCTGCATTGGAGTGGGAAGGGGAAGCCTTGGGTCAGGCTCGACGCAAAGATGCCTTGCCCTTTGGACGTTGTGTGGGCGCCCTACGATCTGCTCCAAACTCCCTAG 846 0.5733 MTLDAAYLRGSMAAILSVLQHSSCPENMIFHFLSAASKPSSFSTLNQTLTNSFPYLNFQIYPFDDIAVSRLISTSIRSALDTPLNYARSYLADLLPRCIVRVVYLDSDLILVDDIAKLAATPLSDTEVLAAPEYCSANFSTYFTPSFWANPSLSLTFSNRKRPCYFNTGVMVIDLQRWRAGDYTTVIEEWMELQKRMRIYELGSLPPFLLVFAGRITAVDRRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWVRLDAKMPCPLDVVWAPYDLLQTP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1081 281 Pfam Glycosyl transferase family 8 1 259 IPR002495 GO:0016757
Vra7g1081 281 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 277 IPR029044 -
Vra7g1081 281 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 264 IPR029044 -
Vra7g1081 281 PANTHER HEXOSYLTRANSFERASE 1 281 - -
Vra7g1081 281 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1081 Vra-Chr7 26426300 26427598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1081 1 280 Glycosyltransferase AT3G50760 72.695 3.70e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1081 K20893 - gmx:100805007 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0646 11 5168250 5169966 Vra7g1081 7 26426300 26427598 PCT