Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0922 ATGGAAGTGATGGCATACCAGTTTTCTCGGTTACCATACTCAGATTCGCTCAAACTGCTAGAGGCTGATATACAACAAGCAAATGCTTTGGCCGCTGAAATAACCAGGACAAAGGGTGGGACTCTTCTCCAAATGAAATTGGCTTACAACCATTTGGCTCCTCTCTTTCTGTTGTTGCTACAGTGGATGGATTTTTCTTGTACATGCTTACTACTCAGATATCTTGACCTCTTTCACATAGTTGTATCCAAGGTACACAACGATGGTAGATCAAATATGACTCCTCCTGGAAGGAAAGCAACCATCAGGGAGTTTTATGCTATTATTCTGCCATCTCTTCAAAGACTTCATGGTAGCATAGAAAGCTCAAGTTATGGCAAGAAATTGATTGAAGGAGATGCAAAACCAATCCATGTGGATTTGGAAAGAGAAGATGAATGTGGGATATGCTTAGAGCCTTGCACTAAAATGGTTTTACCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAAATTGTCAGAGTCTTGCCCTTTTTGCCGTGGTAGCTTAAGGAGAGTTAATTCTGAGGATCTGTGGGTACTCACTTGTAATGAAGATGTTGTTGATGCTGAAACAGTTTCCAAGGAGGACTTGTTACGTTTCAACCTTTATATCAATAACCTACCTAAAGATCACCCGGATGCACTTTTCTTAATGTATTATGAGTATCTGATTTGA 732 0.403 MEVMAYQFSRLPYSDSLKLLEADIQQANALAAEITRTKGGTLLQMKLAYNHLAPLFLLLLQWMDFSCTCLLLRYLDLFHIVVSKVHNDGRSNMTPPGRKATIREFYAIILPSLQRLHGSIESSSYGKKLIEGDAKPIHVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNKLSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFNLYINNLPKDHPDALFLMYYEYLI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0922 243 Coils Coil 17 37 - -
Vra7g0922 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 196 IPR013083 -
Vra7g0922 243 PANTHER RING FINGER PROTEIN 41, 151 6 243 - -
Vra7g0922 243 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 243 - -
Vra7g0922 243 ProSitePatterns Zinc finger RING-type signature. 162 171 IPR017907 -
Vra7g0922 243 ProSiteProfiles Zinc finger RING-type profile. 147 185 IPR001841 -
Vra7g0922 243 SMART ring_2 147 184 IPR001841 -
Vra7g0922 243 Pfam Ring finger domain 145 185 IPR001841 -
Vra7g0922 243 SUPERFAMILY RING/U-box 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0922 Vra-Chr7 20677251 20679598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0922 - - gmx:100790422 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1435 2 22458000 22460114 Vra7g0922 7 20677251 20679598 PCT