Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0914 ATGCTTCCCTCTCACTTTCCTCTTCGTTGGGAAAGCACTGGAGACCAATGGTGGTATGCGTCTCCCATTGATTATGCTGCTGCAAATGGGCTCTATGATTTGGTTACTGAGCTTCTCCACCTTGACACCAACCTCCTCATCAAGCTCACGTCCCTCCGCCGCATTCGCCGCCTCGAAGCCGTGTGGGACGATGAGTCTAAGTTTGAGGATGTTGCCAAGTGCCGCTCCAAGGTTGCTAGGAATCTCATGCTTGAGTGTGAGATGGGAAAAGGGCACAACTCTCTCATCCGCGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCCTCGGCTGGGGATGCTGACTTTGTTCTGGAGTTGTTGGGGAGAGACCCTTTGTTGGTGTTTGGTGAAGGAGAGTATGGTGTCACTGACATGCTGTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTCAAGCTCCTGCTTCATTCTGCTCTGTCAAGAAAGGAGAGTCTTGCTGTCAGTGGAGAAGAATTGGAAGAGAAATTGGATGAAGGGTCTAAGGTTTTCAAGAGGGATGTGATCAACAGGGCCATTCATGCTGCTGCCAGAGGAGGGAATTTGGAAATACTGAAACAGCTTCTAGCAAGTGTTTCTGTTTCTCAAATTTTGTCTTATAGAGATGCCCAAGGATCTACTGTCCTGCATGCAGCTGCTGCAAGAGGCCAGATTGAGGTTGTGAGAAATCTAACTGAATCCTATAATATTGTAAACTCAACTGATACTCAAGGAAATACAGCATTACATATAGCTTGTTACAGAGGTTACTTACCTGTGGTAGAGTTTCTGATTGGAGCATCTCCCTCATTAGCAACTTTAACCAATAACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGAGAAGCACATTGAGCTGATGAAGCAATTGACAAGTGAAAAGATTGTGAGCATGAAGGACATCATCAATGTCAGGAACAATGAAGGAAGAACAGCTCTTCATGTTGCTGTGATGCATAACATCAAATGTGAAGTGGTGGAATTACTGATGTCTGTTTCATCAATTGATTTCAACATTCGTGACACTGATGGCATGACCCCTTTGGATCATCTTAGGAAACAAAGATCAAGATCAAGATCAGCATCTTCTGACTTTTTAATCAAGCACTTAATTTCAGCTGGAGGGAACTCCAATTGTACGGACTACATGACAAGAAAAGCTCTTGTTAACCATCTTAGGACTCATGGTATTGGAGCAAGTCCTGGAACATCATTTAGAATACCAGATTCTGAGATATTGTTGTACACAGGCATTGAGAATTCATGTGATACGAATTATGATGAGGCAAGTGTGGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGAGTCACCCAATTCCCCATGCAACAGCAACAATAGTTCTGTTAATTATGGTGCAAGGCGTTTAAAGTTTCTGCTGCAGTGGCATGGGATAAGAGACACGAAAGAAGCAGCCTCGGAGTTAGAAGATGATGTTTCTGAGAATTCTTTTAGTTCAAGGAAAAACTTGGAGGAACTTCCCATCCCATTGAGGCAAAGATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATGTTCCAAGTGCTTCAGAGAGAAAATATTTTCATGCAGGCCTAATGCAAGGAGTGATTAAGGTAAAGCCACAAGGCCCTCTACCTGTTCATTCAACTTCTGGTCTTTTTCAAGAACTATCTATATCTTCTCATGCTTCTAATAATAAGCAAAATGGTGTTGATATAATGAGACCCTCTTGCTCCAATGGACCAATGGATGGTGGTGGCAGCCTCCAGTTGAACTATAAGCTTGGCTCTTTCAATAAGAAAATGATGAACCGCTATTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAAAGTCAAACCGCAGCTCTAAGAATTTTAGTTCTTTAGTTGCATAA 2034 0.4292 MLPSHFPLRWESTGDQWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDDESKFEDVAKCRSKVARNLMLECEMGKGHNSLIRAGYGGWLLYTAASAGDADFVLELLGRDPLLVFGEGEYGVTDMLYAAARGKNCEVFKLLLHSALSRKESLAVSGEELEEKLDEGSKVFKRDVINRAIHAAARGGNLEILKQLLASVSVSQILSYRDAQGSTVLHAAAARGQIEVVRNLTESYNIVNSTDTQGNTALHIACYRGYLPVVEFLIGASPSLATLTNNYGDTFLHMAVVGFRSPGFCRLEKHIELMKQLTSEKIVSMKDIINVRNNEGRTALHVAVMHNIKCEVVELLMSVSSIDFNIRDTDGMTPLDHLRKQRSRSRSASSDFLIKHLISAGGNSNCTDYMTRKALVNHLRTHGIGASPGTSFRIPDSEILLYTGIENSCDTNYDEASVESNSWSSEINNYESPNSPCNSNNSSVNYGARRLKFLLQWHGIRDTKEAASELEDDVSENSFSSRKNLEELPIPLRQRYSKMCSLPNNKRTLSIRTYVPSASERKYFHAGLMQGVIKVKPQGPLPVHSTSGLFQELSISSHASNNKQNGVDIMRPSCSNGPMDGGGSLQLNYKLGSFNKKMMNRYFSFGAHGQALEDANSCTKSNRSSKNFSSLVA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0914 677 MobiDBLite consensus disorder prediction 658 677 - -
Vra7g0914 677 Pfam Ankyrin repeats (many copies) 226 278 IPR002110 GO:0005515
Vra7g0914 677 SUPERFAMILY Ankyrin repeat 105 419 IPR036770 -
Vra7g0914 677 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Vra7g0914 677 ProSiteProfiles Ankyrin repeat region circular profile. 224 246 - -
Vra7g0914 677 Gene3D - 12 427 IPR036770 -
Vra7g0914 677 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 672 - -
Vra7g0914 677 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Vra7g0914 677 ProSiteProfiles Ankyrin repeat region circular profile. 257 278 - -
Vra7g0914 677 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 672 - -
Vra7g0914 677 SMART ANK_2a 374 410 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 291 331 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 134 164 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 188 216 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 257 286 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 100 129 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 224 253 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 18 47 IPR002110 GO:0005515
Vra7g0914 677 SMART ANK_2a 339 370 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0914 Vra-Chr7 20265332 20268391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0914 156 380 Miscellaneous Gene Families AT2G31820 33.480 2.47e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0914 - - gmx:100791999 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1420 2 22344637 22347794 Vra7g0914 7 20265332 20268391 PCT