Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0621 ATGACAACCAAACAAGTGAGAAATAGTGAAAAGATGTTGGGTACTCATGACCATGATAATACTCCTTCTTGGTCGCTTGGAAGATGCATTTCATCTGTAAAAATGGAGCCAACCCTCAGAAACCTTCCTAGAGCTGCTTCTGAATCACTACATACCAACCCCAAGAAGAAGCGTGGAGGATGGAAGGCCATAACTTTTATTTTAGGGAATGAAACTTTTGAGAGGTTGGCAGTGTTTGGTTTATTTGCGAACTTTATGGTGTATTTGACAAGAGAACTTCATTTGGACCAAGTTACTGCTTCTAACATTCTGAGTTTATGGTTTGGGATCACAAACTTTGCCCCACTAGTTGGTGCCTTCATTTCTGACGCCTATGTTGGTCGTTTCCGGACCATAGCTTTTGCATCATTTGGTACCCTTTTGGGGATGGTCGTGGTGACTTTAACATCATGGTTACCACAGTTGCAGCCTCCACCTTGTAGTCCTGAGGAACTGGCATCTGGGAAGTGTGTTAGGGCAAGCAATTCTCAAATGGGTGTGTTGATTTTGGGACTATGCTGTTTAACCATAGGTTCTTCTGGGGTAAGACCATGCAGCATCCCATTTGGTGTTGACCAATTTGATCCAACGACCGAAGAAGGGAAGAAAGGGATTAACAGCTTCTTCAACTGGTACTACACCACATTCACCATGGTCCTTCTGATCACTCAGACAGTGGTGGTCTACGTCCAAGATTCTGTCAGCTGGAAAATTGGGTTTGGGATACCTACTTTCTGCATGCTCTGCTCCATAATCATGTTCTTTATGGGGGCAACCCTTTATGTACGTGTGAAGCCTGAAGGAAGCGTTTTTTCTGGTGTTGCTCAAGTTCTAATGGCTGCTTATAGAAAGAGAAAACTCAGGTTTCCAATGAGTGAGGAGAAGCAAGAAGGGTCTTTCTATGATCCCCCTCTTACTGGGACCACCTTTGTGTCAAAGCTGCCTTTAACCAAACAATTCAGGGCCTTGAACAAAGCTGCTTTAATTATGGAAGGTGAGTTAAACCCAGATGGGAGCATAGTGAATGATTGGAGACTGGTTAGCATCCAAAAGGTAGAAGAGGTGAAATGCTTAATAAGAATTATCCCAATTTGGGCAGCAGGGATCCTTAGTCTGACTTCCATAGCACAACAAGGGACATTTACTGTGTCACAAGCAATGAAAATGAACAGACACCTGGGACCCAACTTCCAAGTCCCACCTGGTTCAATGTCAGTCATATCATTAATCACCATAGCTTTTTGGCTCCCATTCTATGACAGATTCTTAGTGCCAAAGCTCAGAAAAATTACCAACCATGAAGGGGGCATCACTCTACTCCTAAGAATTGGAATTGGCATGGTCTTCTCTATTCTTTCCATGGTTGTGGCTGGCATGGTTGAAAAACTCAGAAGGGATTCAGCAAATTCAAATCCAACACCTCTTGGAATTGCTCCCATGTCAGTCTTTTGGCTAGCTCCACACTTGATCCTTATGGGGCTCTGTGAGGCATTCAATATAATAGGACAAATTGAGTTCTTCAACAGACAATTTCCTGAACATATGAGAAGCATTGGCAATTCCTTGTTTTCCTGTTCTTTTGCTACAGCTAACTATGTCAGCACCATAATAGTGAATGTGGTTCATCACACTACAAGAACATCTAGCCACCCAGATTGGTTGACAAATGATATAAATGCTGGGAGAATAGACTACTTTTACTATCTTATAGCAGTGTTAGCAACCTTGAATCTCTTCTTTTTTATATTTGTTGCTAGAAGATATCAGTACAAGGGAAGTGTCGACTTCAATGATGAAACTCACCAACTGGAGCTTGGATCTCACAAACCCTAA 1872 0.4241 MTTKQVRNSEKMLGTHDHDNTPSWSLGRCISSVKMEPTLRNLPRAASESLHTNPKKKRGGWKAITFILGNETFERLAVFGLFANFMVYLTRELHLDQVTASNILSLWFGITNFAPLVGAFISDAYVGRFRTIAFASFGTLLGMVVVTLTSWLPQLQPPPCSPEELASGKCVRASNSQMGVLILGLCCLTIGSSGVRPCSIPFGVDQFDPTTEEGKKGINSFFNWYYTTFTMVLLITQTVVVYVQDSVSWKIGFGIPTFCMLCSIIMFFMGATLYVRVKPEGSVFSGVAQVLMAAYRKRKLRFPMSEEKQEGSFYDPPLTGTTFVSKLPLTKQFRALNKAALIMEGELNPDGSIVNDWRLVSIQKVEEVKCLIRIIPIWAAGILSLTSIAQQGTFTVSQAMKMNRHLGPNFQVPPGSMSVISLITIAFWLPFYDRFLVPKLRKITNHEGGITLLLRIGIGMVFSILSMVVAGMVEKLRRDSANSNPTPLGIAPMSVFWLAPHLILMGLCEAFNIIGQIEFFNRQFPEHMRSIGNSLFSCSFATANYVSTIIVNVVHHTTRTSSHPDWLTNDINAGRIDYFYYLIAVLATLNLFFFIFVARRYQYKGSVDFNDETHQLELGSHKP* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0621 623 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 47 611 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g0621 623 CDD MFS_NPF1_2 64 601 - -
Vra7g0621 623 MobiDBLite consensus disorder prediction 1 20 - -
Vra7g0621 623 PANTHER PEPTIDE/NITRATE TRANSPORTER 47 611 - -
Vra7g0621 623 Gene3D MFS general substrate transporter like domains 42 608 IPR036259 -
Vra7g0621 623 Pfam POT family 129 559 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g0621 623 SUPERFAMILY MFS general substrate transporter 57 602 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0621 Vra-Chr7 11613555 11618734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0621 55 622 Organic Solute Cotransporters AT1G69870 59.686 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0621 - - gmx:100809657 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0621 7 11613555 11618734 Vra11g1276 11 15454428 15459796 PCT