Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0607 ATGAAGAGGGTGAAGAAGCTAGAACAATTGTTGTTGCTTTCCTATAGGCCTAAACCTCTTCAAATTTTCATGGCCATGATGTTTCTCTATTTGCTCTTCACCACCTTCGAAATCGAAACTTCTCTTGCTTTCAATACCAGGTTTGTGTCAGTGTCCTCCTTGCTGGGTACGGAACACCAATACACTCATCTCAGCAAAGCCTCAAACCTTCCTTCGCAAGGGGTGTTCCAAGGTTCAGTGCATCGGAAAACTATGCAGGGGTTGCAGAAAGTTTCTACCTTGAGTTTTATTGATGTTTTGAACGACAGTAGTGTTGCTAAAAACGAGGTTTCTGAACTCCACAAGGTTGCTAGGCATGCTTGGTTTGAAGGGAAGAGGCTTTGGGAAGAAGTCGAGAGTGTGATGAAAATTGACAATGTGACAAGGTTCAAAGCTGAGAACCTTTCTGATTCGTGTCAGAGTTCAATTTCTTTATCTGGTTCTGAATTGAGGGGGGAGAAAGGGGTCACGGTGATGATGCTTCCTTGTGGGTTGACATTAGGGTCTCATGTTACTGTCGTGGGGACCCCTCGTTGGGCTCACTGGGAGGACGATCTTAAGATATCTGTGGTGAAGGAACAGGAGGGGAAGGTGATGGTGTCACAGTTCATGTTGGAGCTTCAGGGTTTGAAGAGTGTGGACAACGAAGACCCTCCCAGGATACTGCATTTCAACCCCAGGTTGAAGGGAGATTACAGTGGTAAGCCTGTTATTGAGCAGAACACTTGTTACAGAATGCAGTGGGGCTCTGCTCTCAGGTGCGAGGGATGGAAATCCCGGGCTGATGAGGATACTGTTGATGAACAGGTTAAATGTGAAAAGTGGATTCGTGATGATGATAGCCACACGGAAGAGGCAAAGGCAACATGGTGGTTGACCAGACTGATAGGGCGAACTAAGAAGGTGACTGTTGATTGGCCATACCCTTTTGTCGAGGGGAGATTATTTGTTCTAACCGTAAGTGCTGGATTGGAAGGTTACCATGTTAGTGTGGATGGAAGGCATGTGACATCTTTTCCTTATCGCACGGGCTTTTCTCTTGAGGATGCGACTGGTCTATCCGTAAAAGGGGATGTTGATGTGCACTCTATATTTGCAGCTTCCTTACCTACATCGCATCCAAGTTTTGCTCCACAAATGCATCTTGAATTACTTCCTCAGTGGAAAGCTCCGCTGCTTCATGTAAATGTAGAGCTTTTCATTGGAATACTTTCTGCTGGCAACCATTTTGCTGAACGGATGGCAGTGAGGAAATCATGGATGCAACATAAACTAGTCAAATCTTCAAATGTTGTGGCTCGGTTCTTTGTTGCCTTGCATGGAAGGAAAGATTTAAATGTGGAGATAAAGAAAGAAGCTGATTATTTTGGCGACATTGTTATTGTGCCCTACATGGATCATTATGACCTGGTTGTGTTGAAGACAATAGCTATCACTGAATATGGGATTCGAGTGGCTGCCAAGTATATCATGAAGTGCGATGATGACACATTTGTCAGAGTTGATTCTATGATCAGCGAAGTAAGAAATGTAAGAAATGGTAGAAGTCTGTATATTGGAAATATGAATTATCACCACAAGCCTCTACGTAATGGCAAATGGGCTGTAACATTTGAGGAATGGTCAAAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGTTATATAATCTCTTCAGATATTGCTCACTTCATTGTATCCAACTTTGAGAAGCACAAACTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTAGAAGAATTCAACAGTTCAAGAGCAGTTGAGTATGTGCACAGCTTGAAGTTCTGCCAATTTGGTTGCATTGAAGATTACTACACTGCACATTACCAATCTCCACGACAAATGACTTGTATGTGGCATAAGTTACAACACCAGGGAAAACCCTTGTGTTGCAACATCAGATAA 1974 0.4326 MKRVKKLEQLLLLSYRPKPLQIFMAMMFLYLLFTTFEIETSLAFNTRFVSVSSLLGTEHQYTHLSKASNLPSQGVFQGSVHRKTMQGLQKVSTLSFIDVLNDSSVAKNEVSELHKVARHAWFEGKRLWEEVESVMKIDNVTRFKAENLSDSCQSSISLSGSELRGEKGVTVMMLPCGLTLGSHVTVVGTPRWAHWEDDLKISVVKEQEGKVMVSQFMLELQGLKSVDNEDPPRILHFNPRLKGDYSGKPVIEQNTCYRMQWGSALRCEGWKSRADEDTVDEQVKCEKWIRDDDSHTEEAKATWWLTRLIGRTKKVTVDWPYPFVEGRLFVLTVSAGLEGYHVSVDGRHVTSFPYRTGFSLEDATGLSVKGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPLLHVNVELFIGILSAGNHFAERMAVRKSWMQHKLVKSSNVVARFFVALHGRKDLNVEIKKEADYFGDIVIVPYMDHYDLVVLKTIAITEYGIRVAAKYIMKCDDDTFVRVDSMISEVRNVRNGRSLYIGNMNYHHKPLRNGKWAVTFEEWSKEEYPTYANGPGYIISSDIAHFIVSNFEKHKLKLFKMEDVSMGMWVEEFNSSRAVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWHKLQHQGKPLCCNIR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0607 657 Pfam Galactoside-binding lectin 171 378 IPR001079 GO:0030246
Vra7g0607 657 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 657 - -
Vra7g0607 657 Gene3D - 167 378 - -
Vra7g0607 657 SMART Gal_bind_lectin_2 174 379 IPR001079 GO:0030246
Vra7g0607 657 Gene3D - 403 650 - -
Vra7g0607 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 657 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra7g0607 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 170 380 IPR001079 GO:0030246
Vra7g0607 657 Pfam Galactosyltransferase 425 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra7g0607 657 CDD GLECT 174 378 IPR001079 GO:0030246
Vra7g0607 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 172 378 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0607 Vra-Chr7 11319589 11325125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0607 1 657 Glycosyltransferase AT1G74800 59.647 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0607 K20843 - gmx:100814480 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1299 11 15923817 15928722 Vra7g0607 7 11319589 11325125 PCT