Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0605 ATGGATCATCATCTGCTGCATGTAGTTGCACTGCTGACACTGATAACATTTGGAGGCACAAGTTGGACCATAGAAGCCTGCAGCCCCATTGACCTGGAAGCTTTGATGAGCTTCAAGAATGGAATTCAAAAGGACACATCTGGTCGCTTAGCTAAGTGGATTGGTGCGAGCTGCTGCAAGTGGGAAGGTATTGTCTGTGAAAATGCAACCTCTAGAGTGATACAGATTAATCTCCCAGGATTTATTTCCACAGATACAGATTTATTTCAAACACAAATGATAGGGCGGATTTCTCCTTCCATAACACTCCTCACCTCCCTTGAAATCATTGATCTTGGTGGTTTAGTTGGTCTTAGTGGAGCTATTCCAAACACCATTGGTTTGCACCTGCCAAAGCTCCAAAAGCTCTACCTTTATGGCAACAATTTAACTGGTCCAATACCAGAAAGCATTGGACAGTTTCCAAACCTCCAAGACCTAGCTCTGCAGGAAAATAAGCTATGGGGGTCTATTCCCATGAGCCTTGGAAGCCTTAAAAGTCTCAAAAGGTTGCTGCTTTATTCAAATAAATTATCAGGTATAATACCATACTCACTTGGGAATTTGATAAATTTGGAAGAATTGGATGCTCATGACAATGCTCTTGTGGGCAATATACCCAATAGTGTTGGTGAGATGAAGGCTTTGACAAAGCTTGATCTTTCAAACAATTTGCTAAGCGGGAAGATGCCTTCTTCATTAACCAATTTAACTGCCATTTCAGTTTTGTATCTGAACACCAATTCTCTTGAGGGAACCATAGCATTTCCTTCAAGATCTGGTGAAATGTCTTCTCTCAGTTTCTTAAGACTCCATAACAATCTCCTTGTTGGAAATATACCTTCCAATATTGGCTATTTGGTATCTCTTCAAAGACTGTCACTATCAAACAACAAACTTGAAGGAGTACTGCCGTCTAGTTTAGGAAAGTTGGTATCACTGACTGAGTTATATCTCAGTGGTAACTTCTTGTCTGATCAAATACCAAAATCACTAGGCCAACTTTCTCGGCTCATAATGTTGAACATCTCTAGAAATTTGATTGAAGGACCATTACCTCAGGAGATATCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTCAACCATCTGAAACTCTCTGCCATTCCAAAATGGATGGCAAACATGTCATCACTTTCCAACATTTACTTGGCTGGTTGTGGAATCCAGGGCCAAATTCCAGATTTTTTCCAAACAACCAATAGTCCAATACAGGAACTGGACTTGTCAGTAAACATTCTCAGTGGAAGCATACCATCATGGATAGGAAGCCTCAGTCAACTCTACTTGTTAAATCTCTCTAGGAACTCTCTTTATTCAGATATCCCTGATTCCTTTATAAATTTGCAAGATCTTGGTGTCCTTGATCTTCACTCAAATAGACTAACAGGTTCCATAGCTCCAGTATTTGACATAGAACAAGGTATTTTCGGGGGTTCACTGAAATTTGTCGATCTTTCCCAAAACAGCTTCTCAAGGGGTATTGAGGAAACTGCTGGAGGGCAATATAGCATTCAGTTTATGAATTTGTCTCATAACCATCTGGAAGGTAGGTTACCAAATTCAATTGGGAGATTGAATTCACTTAATAGTTTGGATTTGAGCTTCAACGAATTAGGCTCCAACATGCCAGAAGTGCTGGCAAATTTAACCTCATTGGAGATATTGAAGCTACAGGAAAATCACTTCACCGGTAAAATTCCAAACGGATTTCTCAAGTTGCTGAAGCTAAAGGAATTAAACGTATCTAACAATCATCTTGAAGGGGAAATTCCAGAGGGCAAACCTTTGATTGACTTTCCTGAGAGTTCATATTCTGGAAATAAAGGGTTATGTGGAAAGCCTCTCGGTCCTTGTAAACTTTGA 1929 0.3981 MDHHLLHVVALLTLITFGGTSWTIEACSPIDLEALMSFKNGIQKDTSGRLAKWIGASCCKWEGIVCENATSRVIQINLPGFISTDTDLFQTQMIGRISPSITLLTSLEIIDLGGLVGLSGAIPNTIGLHLPKLQKLYLYGNNLTGPIPESIGQFPNLQDLALQENKLWGSIPMSLGSLKSLKRLLLYSNKLSGIIPYSLGNLINLEELDAHDNALVGNIPNSVGEMKALTKLDLSNNLLSGKMPSSLTNLTAISVLYLNTNSLEGTIAFPSRSGEMSSLSFLRLHNNLLVGNIPSNIGYLVSLQRLSLSNNKLEGVLPSSLGKLVSLTELYLSGNFLSDQIPKSLGQLSRLIMLNISRNLIEGPLPQEISSLQNLQTLDLSFNHLKLSAIPKWMANMSSLSNIYLAGCGIQGQIPDFFQTTNSPIQELDLSVNILSGSIPSWIGSLSQLYLLNLSRNSLYSDIPDSFINLQDLGVLDLHSNRLTGSIAPVFDIEQGIFGGSLKFVDLSQNSFSRGIEETAGGQYSIQFMNLSHNHLEGRLPNSIGRLNSLNSLDLSFNELGSNMPEVLANLTSLEILKLQENHFTGKIPNGFLKLLKLKELNVSNNHLEGEIPEGKPLIDFPESSYSGNKGLCGKPLGPCKL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0605 642 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Vra7g0605 642 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 641 - -
Vra7g0605 642 Pfam Leucine Rich Repeat 229 250 IPR001611 GO:0005515
Vra7g0605 642 Pfam Leucine Rich Repeat 132 152 IPR001611 GO:0005515
Vra7g0605 642 PRINTS Leucine-rich repeat signature 229 242 - -
Vra7g0605 642 PRINTS Leucine-rich repeat signature 372 385 - -
Vra7g0605 642 SUPERFAMILY L domain-like 26 313 - -
Vra7g0605 642 Gene3D Ribonuclease Inhibitor 26 84 IPR032675 -
Vra7g0605 642 Gene3D Ribonuclease Inhibitor 85 269 IPR032675 -
Vra7g0605 642 Gene3D Ribonuclease Inhibitor 388 642 IPR032675 -
Vra7g0605 642 Gene3D Ribonuclease Inhibitor 272 387 IPR032675 -
Vra7g0605 642 SMART LRR_sd22_2 226 252 - -
Vra7g0605 642 SMART LRR_sd22_2 178 199 - -
Vra7g0605 642 SMART LRR_sd22_2 300 318 - -
Vra7g0605 642 SMART LRR_sd22_2 202 221 - -
Vra7g0605 642 SMART LRR_sd22_2 547 573 - -
Vra7g0605 642 SMART LRR_sd22_2 372 392 - -
Vra7g0605 642 SMART LRR_sd22_2 324 350 - -
Vra7g0605 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 641 - -
Vra7g0605 642 SUPERFAMILY L domain-like 275 615 - -
Vra7g0605 642 Pfam Leucine rich repeat 278 335 IPR001611 GO:0005515
Vra7g0605 642 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Vra7g0605 642 Pfam Leucine rich repeat 425 483 IPR001611 GO:0005515
Vra7g0605 642 SMART LRR_typ_2 300 323 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 226 249 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 547 570 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 130 154 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 372 397 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 571 594 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 324 348 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 446 469 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 595 617 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 470 500 IPR003591 -
Vra7g0605 642 SMART LRR_typ_2 178 201 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0605 Vra-Chr7 11294702 11297406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0605 2 642 Receptor kinase-like Gene Family AT4G08850 33.188 3.86e-90 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0605 - - pvu:PHAVU_003G071800g 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1301 11 15959396 15961965 Vra7g0605 7 11294702 11297406 PCT