Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0298 ATGAACAGAAAAAGCATGGAAAACAACGGGGAAAGCCATAGCAGAAGTGGTAGTTTTAGGATGGGGGCAAAAGTTCACACTGTGCTTGAGCTTGGTACTGTTCATACACACACTAGTCTTCTCCTAGATGGTGATGGTGATGGTGATGGTGATCGAGATGTTGGTGAGGAGAGAGAGAAACACCCAAAACCTCTCACATACTCTCTCTCTCCTAGGCAGATCAAGTCCCTAGTTGCTCTCTGCGACACCATCATACCTTCAATCGACAACAACCTCGTTCGCTCCTCCGATGAATCTGTTGCCAACTTCTACAACACTTCAGCTTCCATGGCTGGAACACCTCACCATCTAGAGAAAGTGATAAGTGAGAAACTGAAGCACCCGAGTACATGGCTCCTGCTACTGACATTATGGCTACTGTCTACGTGGTTTGGCACGTTCATACTGTGTGGCATGGCGAGTGTTTCATCAAGGTTTCCCTTCTTCCATAGCTACCCTGAAATGTCTCTGCTCAAACGCCAAAGGGCTATGCAGTCTTGGTCTCTCAGTTACCTTCGTCCCCTTAAGATGTTTTTCAGGACTATCAAGCTTCTCACTCTCCTTCTCTTCTTCACTCAGGTAGATGAAGCAGAAGAAAACCCATCATGGAAGGCAATTGGATATTGTGGACCTGATCCAGAGCTTAAAGCACAGTTGAAGAACCACTTCTTACGTAGAACATTGAAGGAAGAAGAACATGAAAAAAAGGACAAGGACGACGACGATGATGATGAAGAAGAGTTCAGAGGTCCTCTTCACAAAGGCCTTGTCCATTTGAACTATCCAATAGACATCATTAAAAATTCTTTAAGACGATTTGGATTCTCAGTCTCTACCACATCTAAAAGGAATAAGGCTTCTAACATGTCATCACCTTCTTTAGTTATCCAATGTGATGCTGTGGTTGTCGGTTCTGGCTCTGGTGGTGGGGTAGTAGCCGGAGTTCTAGCAAATGCTGGTTATAAAGTGCTGGTCTTGGAGAAAGGAAGCTATTGTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCAACAAAGGATATGTCTGTCCTAATACTAGCAGGATCCACAGTTGGTGGTGGATCTGCAGTGAACTGGTCAGCCAGCATTAGAACTCCTGAACATGTATGCAAGGAGTGGTGTGATCGCCATGAGCTAGAACTGTTTGAAAGTAAGTTGTACAAAGAAGCCATGGATGCTGTGTGTGACAAAATGGGAGTCCAATCTGAGATTCAAGAGGAAGGGTTCAACAACGAAGTCCTAAGAAGAGGGTGTCTAGAAATGGGATATCATGTGTGCAATATTCCAAGGAATGCTTCATCGGATCACTACTGTGGTTGGTGCTGCATGGGGTGTAAGAATGGAAAGAAGAAAGGTACTTTAGAAACATGGCTAGTGGATTTGGTGAAATCAGGTAACGGAGCAATCATTCCAAATTGTGAGGCCATACAAGTCTTGCACAAGAGAAAGAAAGGAAGTGAGAGAAAAACAGCTCGTGGAGTGGCTTTTGCAATTGAATACAAAGGAAAAAAGGACATTTGTGTAGTGGAGTCCAAGGTTACAATTGTAGCCTGTGGAGCACTCAGTACTCCAGCATTACTTAAGAAAAGTGGATTGAAGAATGAAAACATAGGAAAAAACTTGCACCTTCATCCAGTGGCAATGGCTTGGGGTCACTTCCCTGATTCATCTTCACCTAAGGTGTGGCCAGAGAAACATAAGAAGAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCGCAGTTTGACAAAACTGGATATGGTGCAGTGATCCAAACGCCTTCATTGCATCCTGGTATGTTCTCCATTCTAATGCCGTGGACTTCTGGCAAAGATATGAAAGATCGAATGCTAAAGTTTTCAAGAACAGCTCATGTATTTGCCCTGGCAAGGGATCAAGGATCAGGAACGGTGAACTCACCTTCTCTTATAAACTATCAGTTGAAAGATGTGGACAAGGAGAATTTAGCTACAGGAATTGAGAAGGTGCTGAGAATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACCCACAATAACAAGGGAAGGAGCATAAATGTTAAGAAGGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGTTCAGTGTCTTTAACAGACCTTACAACACCATTGTGTTCAGCACATCAGATGGGAAGTTGTAAGATGGGCACTAATCCAAGTAACTCAGTTGTGAACCAAATGGGAGAGACATGGGAAGTGGAGGGCCTTTATTTGGCAGACACTAGTGTCTTTCCCACAGCTTTAGGTGTCAATCCGATGGTCACTGTTCAGGCTATTGCTTATTGCATAGCTCAGTCTGTTGTTCAAGTTCTTAGAAGGAAGAGAAATTGA 2466 0.4367 MNRKSMENNGESHSRSGSFRMGAKVHTVLELGTVHTHTSLLLDGDGDGDGDRDVGEEREKHPKPLTYSLSPRQIKSLVALCDTIIPSIDNNLVRSSDESVANFYNTSASMAGTPHHLEKVISEKLKHPSTWLLLLTLWLLSTWFGTFILCGMASVSSRFPFFHSYPEMSLLKRQRAMQSWSLSYLRPLKMFFRTIKLLTLLLFFTQVDEAEENPSWKAIGYCGPDPELKAQLKNHFLRRTLKEEEHEKKDKDDDDDDEEEFRGPLHKGLVHLNYPIDIIKNSLRRFGFSVSTTSKRNKASNMSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYCARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAVNWSASIRTPEHVCKEWCDRHELELFESKLYKEAMDAVCDKMGVQSEIQEEGFNNEVLRRGCLEMGYHVCNIPRNASSDHYCGWCCMGCKNGKKKGTLETWLVDLVKSGNGAIIPNCEAIQVLHKRKKGSERKTARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKKSGLKNENIGKNLHLHPVAMAWGHFPDSSSPKVWPEKHKKSYEGGIMTAMSTVVAQFDKTGYGAVIQTPSLHPGMFSILMPWTSGKDMKDRMLKFSRTAHVFALARDQGSGTVNSPSLINYQLKDVDKENLATGIEKVLRILAAAGAEEIGTHNNKGRSINVKKVSYHEFEKFVKEESSVSLTDLTTPLCSAHQMGSCKMGTNPSNSVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCIAQSVVQVLRRKRN* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0298 821 PIRSF Lg_Ch_AO 56 821 IPR012400 GO:0046577
Vra7g0298 821 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 46 820 - -
Vra7g0298 821 Gene3D - 742 819 IPR036188 -
Vra7g0298 821 MobiDBLite consensus disorder prediction 42 64 - -
Vra7g0298 821 MobiDBLite consensus disorder prediction 39 64 - -
Vra7g0298 821 Pfam GMC oxidoreductase 312 578 IPR000172 GO:0016614|GO:0050660
Vra7g0298 821 SUPERFAMILY FAD/NAD(P)-binding domain 309 816 IPR036188 -
Vra7g0298 821 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 46 820 - -
Vra7g0298 821 Pfam GMC oxidoreductase 679 807 IPR007867 GO:0016614
Vra7g0298 821 MobiDBLite consensus disorder prediction 1 21 - -
Vra7g0298 821 Gene3D - 294 626 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0298 Vra-Chr7 4596736 4604034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0298 34 816 Acyl Lipid Metabolism Gene Families AT4G19380 56.361 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0298 K17756 - gmx:100778575 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0922 11 7956980 7963917 Vra7g0298 7 4596736 4604034 PCT