Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0922 ATGGAGGAGAGAACCATAGGAAGAAATGGAAGCTCTAGAAAGGGTAGCTTTAGGTTTGGAGTAGGAGTGGATGGAAAGAAGGATCACAGTGTGGTGGAGCTTGGAAGTATTGACACACACAAACTTCTTCTCAGCGGAGGAGAGAAAGAGAAAAAACAACAACCTCTCACCAACTCTCTCTCTTCCAGGCAAATGAAATCCCTATCTGCTCTCTGTGACAGTATCTTACCTTCCGTCGACCACTCCGTTCACACTTCCGATGATTCTGTCAACAAGTTCTATCGGATTTCAGCTTCCATGGCAGGCACACCAGAACTTTTAGGGGGAGTGATATGTGAGAAGCTGAAACACCCATTGACAGGGTTACTGAAGTTGGCGTTATGGGGGTTGTCAACGTGGTTTGGAACATTAATTTTGTGTGGGATGGGCTGTGTCTCAACAAAATTTCCCTTCATCCATAGCTATCCTGAGTTGTCTCTGCAGAAAAGACAAGAGATCATGCGATCATGGTCTCTCAGTTACATTCGTCTCTTCAGACTGCTCTTCAGGACCATCAAACTTCTCACTCTCCTTCTCTTCTTTACTCAGACAGATGAATCAGAAGAGAACTTTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAAAATTCAAAGCTCAGTTGAAGAACCACTTTTTAGATGGAAAATCTAAGGGAGCTGAAGATGATAAGGAAGATGAAGATGCAGAAGAGGTGATAGGACCCCTCTACAAAGGTCTTGTCCATCTCAATAACCCACGAGACATCGCTGCAGATGCTCTCAGACGGTTAGGATTCTCTGTCTCTGTCATTCGTAGAAAGCACAAAGCTGCAGCAAACTTGTCTTCTCCTTCTTTGGTGATTCAATGTGATGCTGTGGTGGTTGGTTCTGGCTCAGGTGGTGGAGTCATAGCTGGTGTTCTGGCAAAAGCTGGTTACAAAGTGCTGGTGTTGGAAAAAGGAGGGTATTCTGCAAGGAACAATCTTTCCCTTCTTGAAGGACAAACCATGGATCAAATGTACCTCAATGGTGGATTGGTTGCAAGTGATGACATGGGTATGTTCATACTATCGGGATCCACTGTTGGTGGAGGGTCGGCGATAAACTGGTCTGCTTGCATCAAAACCCCTCAGCATGTGTGCAAGGAATGGTGTGAGAAACATGGGCTTGAGCTGTTTGAGAGTGAATTGTATAGAGAAGCCTTGGATGCTGTCTGTGAGAAGATGGGAGTTCAATCTGAGATTGAAGATGAAGGATTCAACAATGCTGTTCTGAGAAAAGGGTGTCAAGAGATGGGGTATCCTGTGAATACAATTCCTAGGAATTCTTCATCAGATCATTACTGTGGCTGGTGCTGCATGGGTTGTAAGGATGGGAAGAAGAAGGGCACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCAATTCTTCCAGGTTGTGAGGCACTGAAAGTCTTGCACAAGAAAATTGAAGGGAGGGATAGAAAGGTTGCAGGTGGAGTGGCCTTTGAATTTGAATATAAAGGGATTAAGGACATTTGTGTGGTGGAGTCCAAGGTCACCATTGTAGCATGTGGAGCTCTATGTACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATTGGGAGGAACTTACATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCAGATGAACCTGGTTCTGAGGTGTGGCCGGAGGCAAATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCCTCTGTTGTTGCAGAGTTTGAACAATCTGGATATGGTGCAGTAATCCAAACACCTTCATTGCATCCTGGCATGTTCTCAATTGTCACACCGTGGACTTCTGGAGTCGATATAAGAGATCGAATGCGAAAATTTTCTAGAACAGCTCATATATTTGCACTGGCAAGGGATAAAGGATCAGGTACTGCGGAATCACCACATCGTATCAGTTATAAATTGGCAGGCGTAGATGAAAAGAACTTGCAGAAAGGAATTGAAAAGGTGCTGAGAATTCTGGCGGCTGCTGGAGCTGAAGAAATTGGAACACATCATAATAAGGGAAGGACCTTAAATGTAAAGCAAGTGAGCTATCATGAGTTTGAGAAGTTCGTTAAGGAAGAAAGTTCAAGGCCACTGGGAGACCTTTCAACACCATTGTGTTCAGCACATCAAATGGGGAGTTGCAGGATGGGTTCTAATCCAAAGCAATCAGTGGTGAATCAGACAGGAGAAACATGGGAAATGGAAGGCCTTTATGTGGCTGATACAAGTGTCTTTCCCACAGCTTTGGGAGTGAATCCAATGGTCACTGTTCAAGCTATTGCTTACTGCGTAGCACAATCTGTCGTAGAAGTTCTCAGAAGGAAAAGAACTAAGTGA 2427 0.4446 MEERTIGRNGSSRKGSFRFGVGVDGKKDHSVVELGSIDTHKLLLSGGEKEKKQQPLTNSLSSRQMKSLSALCDSILPSVDHSVHTSDDSVNKFYRISASMAGTPELLGGVICEKLKHPLTGLLKLALWGLSTWFGTLILCGMGCVSTKFPFIHSYPELSLQKRQEIMRSWSLSYIRLFRLLFRTIKLLTLLLFFTQTDESEENFSWKAIGYCGPDPKFKAQLKNHFLDGKSKGAEDDKEDEDAEEVIGPLYKGLVHLNNPRDIAADALRRLGFSVSVIRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGQTMDQMYLNGGLVASDDMGMFILSGSTVGGGSAINWSACIKTPQHVCKEWCEKHGLELFESELYREALDAVCEKMGVQSEIEDEGFNNAVLRKGCQEMGYPVNTIPRNSSSDHYCGWCCMGCKDGKKKGTSETWLVDLVKSGNGAILPGCEALKVLHKKIEGRDRKVAGGVAFEFEYKGIKDICVVESKVTIVACGALCTPALLKRSGLRNQNIGRNLHLHPVTMAWGYFPDEPGSEVWPEANKKSYEGGIMTAMSSVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGVDIRDRMRKFSRTAHIFALARDKGSGTAESPHRISYKLAGVDEKNLQKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRPLGDLSTPLCSAHQMGSCRMGSNPKQSVVNQTGETWEMEGLYVADTSVFPTALGVNPMVTVQAIAYCVAQSVVEVLRRKRTK* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0922 808 Pfam GMC oxidoreductase 663 793 IPR007867 GO:0016614
Vra11g0922 808 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 15 808 - -
Vra11g0922 808 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 15 808 - -
Vra11g0922 808 Gene3D - 727 805 IPR036188 -
Vra11g0922 808 SUPERFAMILY FAD/NAD(P)-binding domain 295 799 IPR036188 -
Vra11g0922 808 MobiDBLite consensus disorder prediction 1 23 - -
Vra11g0922 808 PIRSF Lg_Ch_AO 47 808 IPR012400 GO:0046577
Vra11g0922 808 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Vra11g0922 808 Gene3D - 282 605 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0922 Vra-Chr11 7956980 7963917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0922 27 802 Acyl Lipid Metabolism Gene Families AT4G19380 57.234 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0922 K17756 - gmx:100775376 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0922 11 7956980 7963917 Vra11g0922 11 7956980 7963917 ECH
Vra11g0922 11 7956980 7963917 Vra7g0298 7 4596736 4604034 PCT