Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0230 ATGACCTACATAAAAAAAGAGTTCAAGCTGGAGACTAACCCCACACTAGAGGGTCTGATTATGTCCATATCATTTATTACTGGCACTGTTGTTACAATATTCTCTGGGACAGTCTCTGACATGCTCGGAAGGCGTCCTATGCTGATAACATCATCGGTCATGTTTTTCTTTAGCGGTTTGGTGATGCTATGGGCTCCCAATGTTACTGTGGTTCTGTTATCGAGGCTATTGGATGGAATAGCCCTTGCACTCTCCATAACACTCACTCCTCTCTACATATCAGAGATAGCACCACCTGACATCAGAGGCACTCTCAACACTCTCCCACAGTTTTCCTGTTCTGGGGGAATGTTTCTGGCCTACATCATGGTCTTCTCATTGTCCTTGGTCGATTCTCCAAGTTGGAGAGCAATGCTTGCTGTTGTGTCTATTCCTTCTGTTGCTTATTTTCTTCTAGCTGTGTTTTATCTCCCTGAATCTCCTCCTTGGCTTGTTAGTAAAGGGAGAGTCACCGAGGCTAAGAAAGTTCTGCAAAGACTTCGCAACAGTGAAGATGTTTCAGGGGAACTGGCTTTGCTTGCTGAGGGAATGAGTCCAGCGGGTGAAAATGCCACCATAGAAGAGTACATAGTAACACCTGCCAGCGACCTCATGGCCAACAAGGAAGCAGGGAGAGATTGCATAAAGCTCTATGGACCTAACCAAGGACGAGTTTCAATGGTTGCCCAACAGGTGAATGGACAAGGCAGCATGATATCTCGGAGCATGTTAACCTTGTCTCGCCAAGGAAGCATTGTTGCTCAGGCTGAAAATCTCAAAGACCCTCTGGTCAATCTCTTCGGGATCGTCCATGATGGCAATCCCCCGCCCCTTGATTCGGGTGGTTCAAGAGCCATGCTAATGGGAGACACGTTTCAGAGCACTGACAATTTGAATGCTCCATTGCTTTCAGCACAAGGCAGTACCCTGGAGAAGGACAAGGCTTTTGGATCCAAGGATGCATTAGGAACAGGAAATAATGATGGCAACCAACTACCTAAGAGCACTAGCATTGGTGGAGGTTGGAAATTGGTTTATAAATCAGCCGAAGGTGGAAGAAACGAAAAGGGGCTCCAAAGGGTTTACCTGCGTGCAGATCCTAATGCTGGATCGGCTCAAGGTTCATTTTATGATGGCTATGACTTGAATGCAGATGGCAGTGAGTCTTTTCAAGCATCTGCACTTGTCAGCCACTCAGTTCTCTGCCCTAAGAATATAAGCATGAAACCAGAAAATGCTGCCAAACGTACAGGTTTTGGTGGTTTGTCTGATATAGGAGTTAGGCGTGCATTAGGTGTTGGAGTTGGCCTACAACTTCTTCAGCAGGCTGCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGACCAGGCAGGTGTTGGAGCTCTTCTGTCAAATATCGGTATTAGTTCAACATCTGCTTCTTTGCTCGTAAATATCGTTACAACATTAGCAATGCTTCCTTGTATTGCCCTTTCCATGAGGCTCATGGATGTTGCCGGCAGGAGGGCAATAATGTTATACACAATACCCATTCTGATAGTGTCTCTGATGGTACTAATACTCCGGAACTTATTTGACATGAGTGCTAACGTGAATGCAATAGTGACTGCATTGAGTGTGATGGTATACGAAAGCTGCTTCGTCATGGGATTGGGTGCGATTCCGAACATAGTGTGTTCAGAAATCTTCCCAACAAGTGTTCGTGGGATATGCATTTCTATTTGCTCCCTTACGTTCTGGATCAGCATCTTAATAGTGACTTCTTCATTTCCCTTCTTGCTCCAAATCCTTGGGCTTTCAGGGGTCATTGGATTATACGTAATTGGGTGCATAGCTGCATGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAGGGCATGCCTTTGGAAGTCATCATTGATTTCTTTGCTATTGGTGCAAGGCCTGCTGAATGA 1983 0.4523 MTYIKKEFKLETNPTLEGLIMSISFITGTVVTIFSGTVSDMLGRRPMLITSSVMFFFSGLVMLWAPNVTVVLLSRLLDGIALALSITLTPLYISEIAPPDIRGTLNTLPQFSCSGGMFLAYIMVFSLSLVDSPSWRAMLAVVSIPSVAYFLLAVFYLPESPPWLVSKGRVTEAKKVLQRLRNSEDVSGELALLAEGMSPAGENATIEEYIVTPASDLMANKEAGRDCIKLYGPNQGRVSMVAQQVNGQGSMISRSMLTLSRQGSIVAQAENLKDPLVNLFGIVHDGNPPPLDSGGSRAMLMGDTFQSTDNLNAPLLSAQGSTLEKDKAFGSKDALGTGNNDGNQLPKSTSIGGGWKLVYKSAEGGRNEKGLQRVYLRADPNAGSAQGSFYDGYDLNADGSESFQASALVSHSVLCPKNISMKPENAAKRTGFGGLSDIGVRRALGVGVGLQLLQQAAGINGFLYYAPQILDQAGVGALLSNIGISSTSASLLVNIVTTLAMLPCIALSMRLMDVAGRRAIMLYTIPILIVSLMVLILRNLFDMSANVNAIVTALSVMVYESCFVMGLGAIPNIVCSEIFPTSVRGICISICSLTFWISILIVTSSFPFLLQILGLSGVIGLYVIGCIAAWIFVYLKVPETKGMPLEVIIDFFAIGARPAE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0230 660 Gene3D MFS general substrate transporter like domains 424 657 IPR036259 -
Vra7g0230 660 ProSitePatterns Sugar transport proteins signature 1. 508 524 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra7g0230 660 PRINTS Sugar transporter signature 72 91 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra7g0230 660 PRINTS Sugar transporter signature 454 464 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra7g0230 660 PRINTS Sugar transporter signature 553 574 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra7g0230 660 PRINTS Sugar transporter signature 576 588 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra7g0230 660 PANTHER - 1 658 - -
Vra7g0230 660 ProSitePatterns Sugar transport proteins signature 1. 35 52 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra7g0230 660 Pfam Sugar (and other) transporter 436 648 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra7g0230 660 Pfam Sugar (and other) transporter 15 195 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra7g0230 660 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 658 - -
Vra7g0230 660 SUPERFAMILY MFS general substrate transporter 3 646 IPR036259 -
Vra7g0230 660 Gene3D MFS general substrate transporter like domains 1 252 IPR036259 -
Vra7g0230 660 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 641 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0230 Vra-Chr7 3497097 3499683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0230 23 660 Organic Solute Cotransporters AT3G51490 50.000 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0230 - - vun:114179620 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0877 11 7420304 7424085 Vra7g0230 7 3497097 3499683 PCT